Regulog DVU2827 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:
Biological process:	Pyruvate metabolism
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Pyruvate metabolism

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028	6	2
Desulfovibrio desulfuricans G20	5	2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	6	2
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098	4	2
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough	5	2
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
dtcP	Desulfohalobium retbaense DSM 5692	* Desulfomicrobium baculatum DSM 4028 Site: position = -370 score = 5.84292 sequence = GGTTGCAAATTTGCAACG Site: position = -422 score = 5.4684 sequence = CGTCGCAAACTTGCAACA Gene: Dbac_1588: TRAP dicarboxylate transporter, DctP subunit	* Desulfovibrio desulfuricans G20 Site: position = -196 score = 5.16796 sequence = TGTTTCATAATTGGAACA Site: position = -265 score = 4.8925 sequence = TGTTCCACCTTTGCAACA Gene: Dde_1275: TRAP dicarboxylate transporter, DctP subunit	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -204 score = 4.82013 sequence = CGTTCCAAAAATGAAACC Site: position = -272 score = 4.66343 sequence = CGTTTCGTTTTTGCATCA Gene: DVU2822: TRAP dicarboxylate transporter, DctP subunit	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1932: TRAP dicarboxylate transporter, DctP subunit	Lawsonia intracellularis PHE/MN1-00	TRAP dicarboxylate transporter, DctP subunit
dctM	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1589: TRAP dicarboxylate transporter, DctM subunit	Desulfovibrio desulfuricans G20 Gene: Dde_1274: TRAP dicarboxylate transporter, DctM subunit	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2823: TRAP dicarboxylate transporter, DctM subunit	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1931: TRAP dicarboxylate transporter, DctM subunit	Lawsonia intracellularis PHE/MN1-00	TRAP dicarboxylate transporter, DctM subunit
DVU2824	Desulfohalobium retbaense DSM 5692	* Desulfomicrobium baculatum DSM 4028 Site: position = -308 score = 5.84292 sequence = CGTTGCAAATTTGCAACC Site: position = -256 score = 5.4684 sequence = TGTTGCAAGTTTGCGACG Gene: Dbac_1587: Pyruvate formate-lyase (EC 2.3.1.54)	Desulfovibrio desulfuricans G20 Gene: Dde_1273: Pyruvate formate-lyase (EC 2.3.1.54)	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -222 score = 5.03133 sequence = TGGTGCAAAAAAGCATCA Site: position = -263 score = 4.29152 sequence = CGTCGCAAAAATGGATGG Site: position = -398 score = 4.74408 sequence = AGTCGCAAGTTTGCAGCT Site: position = -276 score = 5.36822 sequence = TGTTGCAAAAATGCGTCG Gene: Ddes_1436: Pyruvate formate-lyase (EC 2.3.1.54)	Desulfovibrio magneticus RS-1	* Desulfovibrio piger ATCC 29098 Site: position = -208 score = 5.18559 sequence = TGATGCATTTTAGCATCA Site: position = -157 score = 4.86265 sequence = AGGCGCAGATTTGCATCA Site: position = -332 score = 5.26644 sequence = GGGTGCAAAAATGCATCA Site: position = -89 score = 4.41802 sequence = TGTTACAAAAATGGCACA Gene: DESPIG_02849: Pyruvate formate-lyase (EC 2.3.1.54)	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2824: Pyruvate formate-lyase (EC 2.3.1.54)	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Pyruvate formate-lyase (EC 2.3.1.54)
DVU2825	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1586: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio desulfuricans G20 Gene: Dde_1272: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1435: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02850: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2825: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
DVU2827	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1585: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio desulfuricans G20 Gene: Dde_1270: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1434: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02851: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2827: PAS modulated sigma54 specific transcriptional regulator, Fis family	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	PAS modulated sigma54 specific transcriptional regulator, Fis family
Ddes_1433	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1433: hypothetical protein	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
DVU2820	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1590: amidohydrolase family protein	* Desulfovibrio desulfuricans G20 Site: position = -254 score = 4.88282 sequence = GGTTGCAAAAGTGAAACG Gene: Dde_1278: amidohydrolase family protein	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -479 score = 4.29152 sequence = CCATCCATTTTTGCGACG Site: position = -344 score = 4.74408 sequence = AGCTGCAAACTTGCGACT Site: position = -466 score = 5.36822 sequence = CGACGCATTTTTGCAACA Gene: Ddes_1437: amidohydrolase family protein	Desulfovibrio magneticus RS-1	* Desulfovibrio piger ATCC 29098 Site: position = -356 score = 4.86265 sequence = TGATGCAAATCTGCGCCT Site: position = -305 score = 5.18559 sequence = TGATGCTAAAATGCATCA Site: position = -181 score = 5.26644 sequence = TGATGCATTTTTGCACCC Site: position = -424 score = 4.41802 sequence = TGTGCCATTTTTGTAACA Gene: DESPIG_02848: amidohydrolase family protein	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -499 score = 4.82013 sequence = GGTTTCATTTTTGGAACG Site: position = -431 score = 4.66343 sequence = TGATGCAAAAACGAAACG Gene: DVU2820: amidohydrolase family protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	amidohydrolase family protein
Ddes_1438	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1438: major facilitator superfamily MFS_1	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02846: major facilitator superfamily MFS_1	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	major facilitator superfamily MFS_1

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2827 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --