Regulog DVU2275 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:
Biological process:	Pyruvate metabolism
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Pyruvate metabolism

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098	4	1
Desulfovibrio salexigens DSM 2638	5	1
Desulfovibrio vulgaris Hildenborough	4	1
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU2272	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	* Desulfovibrio piger ATCC 29098 Site: position = -192 score = 5.24001 sequence = CATTAAAATTTCTTT Site: position = -213 score = 5.4983 sequence = AGAGAAAGTTTTTTT Gene: DESPIG_02142: Pyruvate formate-lyase (EC 2.3.1.54)	* Desulfovibrio salexigens DSM 2638 Site: position = -239 score = 5.56175 sequence = AACCAAAATTTCTTT Site: position = -258 score = 5.36915 sequence = AAAAAAATATTTTTT Site: position = -219 score = 5.6909 sequence = AAGAAAAATTTCTTT Gene: Desal_3528: Pyruvate formate-lyase (EC 2.3.1.54)	* Desulfovibrio vulgaris Hildenborough Site: position = -344 score = 5.82004 sequence = AAAGAAAGTTTTTTT Gene: DVU2272: Pyruvate formate-lyase (EC 2.3.1.54)	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Pyruvate formate-lyase (EC 2.3.1.54)
pflA	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02143: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio salexigens DSM 2638 Gene: Desal_3529: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio vulgaris Hildenborough Gene: DVU2271: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Desal_3530	Desulfohalobium retbaense DSM 5692 Gene: Dret_1057: C_GCAxxG_C_C family protein	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_15630: C_GCAxxG_C_C family protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3530: C_GCAxxG_C_C family protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2753: C_GCAxxG_C_C family protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1171: C_GCAxxG_C_C family protein	Lawsonia intracellularis PHE/MN1-00	C_GCAxxG_C_C family protein
DVU2270	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02144: hypothetical protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_3531: hypothetical protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2270: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein
DVU2269	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02145: hypothetical protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_3532: hypothetical protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2269: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2275 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --