Regulog PhnF - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization |
| Effector: | |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PhnF
- By taxonomy - Psychromonadaceae/Aeromonadales
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | 13 | 1 |
| Psychromonas sp. CNPT3 | ||
| Moritella sp. PE36 | ||
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | ||
| Aeromonas salmonicida subsp. salmonicida A449 | ||
| Tolumonas auensis DSM 9187 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| phnF |
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Psychromonas ingrahamii 37 Site: position = -17 score = 3.92949 sequence = ACATCTAGACAA Gene: Ping_3696: Phosphonate utilization transcriptional regulator PhnF, GntR family |
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Phosphonate utilization transcriptional regulator PhnF, GntR family |
| phnD |
Gene: Ping_3695: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) |
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Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) |
| phnC |
Gene: Ping_3694: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) |
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Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) |
| phnE |
Gene: Ping_3693: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1) |
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Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1) |
| phnG |
Gene: Ping_3692: putative phosphonate utilization PhnG protein |
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putative phosphonate utilization PhnG protein |
| phnH |
Gene: Ping_3691: phosphonate metabolism protein phnH |
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phosphonate metabolism protein phnH |
| phnI |
Gene: Ping_3690: phosphonate metabolism PhnI protein |
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phosphonate metabolism PhnI protein |
| phnJ |
Gene: Ping_3689: phosphonate metabolism PhnJ protein |
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phosphonate metabolism PhnJ protein |
| phnK |
Gene: Ping_3688: Phosphonates transport ATP-binding protein PhnK |
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Phosphonates transport ATP-binding protein PhnK |
| phnL |
Gene: Ping_3687: Phosphonates transport ATP-binding protein PhnL |
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Phosphonates transport ATP-binding protein PhnL |
| phnM |
Gene: Ping_3686: Metal-dependent hydrolase involved in phosphonate metabolism |
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Metal-dependent hydrolase involved in phosphonate metabolism |
| phnN |
Gene: Ping_3685: ATP-binding protein PhnN; Guanylate kinase (EC 2.7.4.8) |
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ATP-binding protein PhnN; Guanylate kinase (EC 2.7.4.8) |
| phnP |
Gene: Ping_3684: Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein |
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Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |