Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog VanR - Moraxellaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Vanillate utilization
Effector: Vanillate
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acinetobacter sp. ADP1 3 2
Acinetobacter baumannii AB0057 4 2
Psychrobacter arcticum 273-4
Psychrobacter sp. PRwf-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
vanA
*
Acinetobacter sp. ADP1

Site:
position = -220
score = 5.26014
sequence = TTTGGATCCAAT

Site:
position = -34
score = 5.51815
sequence = ATTGGATCCAAT

Gene: ACIAD0980: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
*
Acinetobacter baumannii AB0057

Site:
position = -256
score = 4.78434
sequence = TATGGATCCATA

Site:
position = -186
score = 3.73581
sequence = ATTTGATCAATA

Site:
position = -176
score = 4.9295
sequence = TATGGATCCAAA

Site:
position = -34
score = 5.51815
sequence = ATTGGATCCAAT

Gene: AB57_1200: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
vanB
 
Acinetobacter sp. ADP1

Gene: ACIAD0979: vanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)
 
Acinetobacter baumannii AB0057

Gene: AB57_1199: vanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
vanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)
 
CRON 2.
vanK
*
Acinetobacter sp. ADP1

Site:
position = -134
score = 3.99946
sequence = AACCGATCCAAT

Site:
position = -180
score = 5.11498
sequence = TTTGGATCCATT

Gene: ACIAD0982: vanillate transporter (MFS superfamily)
*
Acinetobacter baumannii AB0057

Site:
position = -247
score = 4.78434
sequence = TATGGATCCATA

Site:
position = -153
score = 4.64244
sequence = TTTGGATCCAAG

Gene: AB57_1201: vanillate transporter (MFS superfamily)
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
vanillate transporter (MFS superfamily)
vanP
 
Acinetobacter sp. ADP1

Gene: ACIAD0983: porin for vanillate trafficking
 
Acinetobacter baumannii AB0057

Gene: AB57_1202: porin for vanillate trafficking
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
porin for vanillate trafficking
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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