Regulog T-box(His) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | His-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - His-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Streptococcus pneumoniae TIGR4 | ||
| Streptococcus gallolyticus UCN34 | 11 | 1 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Streptococcus suis 05ZYH33 | ||
| Lactococcus lactis subsp. lactis Il1403 | 11 | 1 |
| Lactococcus lactis subsp. cremoris SK11 | 11 | 1 |
| Streptococcus uberis 0140J | ||
| Streptococcus agalactiae 2603V/R | ||
| Streptococcus sanguinis SK36 | 11 | 1 |
| Streptococcus pyogenes M1 GAS | ||
| Streptococcus mutans UA159 | 13 | 1 |
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus gordonii str. Challis substr. CH1 | 13 | 2 |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Streptococcus mitis B6 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| hisC |
|
*2
Streptococcus gallolyticus UCN34 Site: position = -291 score = 74.78 sequence = TATAAAAGTGTTGAT... Gene: GALLO_1473: Histidinol-phosphate aminotransferase (EC 2.6.1.9) Gene: GALLO_0847: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
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*
Lactococcus lactis subsp. lactis Il1403 Site: position = -271 score = 83.21 sequence = CGAGAGATGAAAAGA... Gene: L0065: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -284 score = 80.98 sequence = AAACAAGAGATGAAA... Gene: LACR_1336: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: SUB0639: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
|
*
Streptococcus sanguinis SK36 Site: position = -387 score = 70.84 sequence = ATTGAAAGCGATGAG... Gene: SSA_1449: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
|
*
Streptococcus mutans UA159 Site: position = -277 score = 70.07 sequence = TAGAAAAGCGATGAG... Gene: SMU.1273: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
|
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -386 score = 69.94 sequence = ATCGAAAGCGATGAG... Gene: SGO_1411: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
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Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
| hisZ |
|
Gene: GALLO_1472: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
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Gene: L0341: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
Gene: LACR_1335: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
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Gene: SSA_1448: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
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Gene: SMU.1272: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
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Gene: SGO_1410: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
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ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
| hisG |
|
Gene: GALLO_1471: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
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Gene: L0066: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
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Gene: SSA_1447: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
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Gene: SMU.1271: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
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Gene: SGO_1409: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
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ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
| hisD |
|
Gene: GALLO_1470: Histidinol dehydrogenase (EC 1.1.1.23) |
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Gene: L0067: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: LACR_1332: Histidinol dehydrogenase (EC 1.1.1.23) |
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Gene: SSA_1446: Histidinol dehydrogenase (EC 1.1.1.23) |
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Gene: SMU.1270: Histidinol dehydrogenase (EC 1.1.1.23) |
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Gene: SGO_1408: Histidinol dehydrogenase (EC 1.1.1.23) |
|
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Histidinol dehydrogenase (EC 1.1.1.23) |
| serB |
|
Gene: GALLO_1469: Phosphoserine phosphatase (EC 3.1.3.3) |
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Gene: SMU.1269: Phosphoserine phosphatase (EC 3.1.3.3) |
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Phosphoserine phosphatase (EC 3.1.3.3) |
| hisB |
|
Gene: GALLO_1468: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
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Gene: L0068: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: LACR_1331: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
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Gene: SSA_1445: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
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Gene: SMU.1268: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
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Gene: SGO_1407: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
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Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
| SMU.1267c |
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Gene: SMU.1267c: hypothetical protein |
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hypothetical protein |
| hisH |
|
Gene: GALLO_1467: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
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Gene: L0069: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: LACR_1329: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
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Gene: SSA_1444: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
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Gene: SMU.1266: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
|
Gene: SGO_1406: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
|
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Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
| hisA |
|
Gene: GALLO_1466: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
|
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Gene: L0070: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: LACR_1328: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
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Gene: SSA_1443: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
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Gene: SMU.1265: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
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Gene: SGO_1405: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
|
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Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
| hisF |
|
Gene: GALLO_1465: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
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Gene: L0071: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: LACR_1327: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
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Gene: SSA_1442: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
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Gene: SMU.1264: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
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Gene: SGO_1404: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
|
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Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
| hisI |
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Gene: GALLO_1464: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
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Gene: SSA_1441: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
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Gene: SMU.1263: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
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Gene: SGO_1403: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
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Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
| SGO_0638 |
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Gene: SMU.1262c: hypothetical protein |
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Gene: SGO_0638: hypothetical protein |
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hypothetical protein |
| hisE |
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Gene: GALLO_1463: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
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Gene: SSA_1440: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
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Gene: SMU.1261c: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
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Gene: SGO_1402: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
|
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Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
| hisK |
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Gene: GALLO_0805: Histidinol-phosphatase (EC 3.1.3.15) |
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Gene: L37351: Histidinol-phosphatase (EC 3.1.3.15) |
Gene: LACR_1325: Histidinol-phosphatase (EC 3.1.3.15) |
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Gene: SSA_1439: Histidinol-phosphatase (EC 3.1.3.15) |
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Gene: SMU.1486c: Histidinol-phosphatase (EC 3.1.3.15) |
Gene: str1232: Histidinol-phosphatase (EC 3.1.3.15) |
Gene: SGO_1401: Histidinol-phosphatase (EC 3.1.3.15) |
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Histidinol-phosphatase (EC 3.1.3.15) |
| ymdC |
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Gene: L33782: Probable aminoglycoside 3'-phosphotransferase (EC 2.7.1.95) (Kanamycin kinase) |
Gene: LACR_1330: Probable aminoglycoside 3'-phosphotransferase (EC 2.7.1.95) (Kanamycin kinase) |
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Probable aminoglycoside 3'-phosphotransferase (EC 2.7.1.95) (Kanamycin kinase) |
| his(I/E) |
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Gene: L0072: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: LACR_1326: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
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Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
| LACR_1334 |
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Gene: LACR_1334: hypothetical protein |
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hypothetical protein |
| SGO_0637 |
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*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -314 score = 51.67 sequence = TATGTTCATCAGAGG... Gene: SGO_0637: Acetyltransferase (EC 2.3.1.-) |
|
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Acetyltransferase (EC 2.3.1.-) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |