Regulog T-box(Gly) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Gly-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Gly-tRNA
- By pathway - Amino acid metabolism
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| SP_1476 |
*2
Streptococcus pneumoniae TIGR4 Site: position = -215 score = 40.4 sequence = TATAATAGTCAGCAG... Gene: SP_1477: hypothetical protein Gene: SP_1476: hypothetical protein |
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*
Streptococcus sanguinis SK36 Site: position = -228 score = 39.51 sequence = TATAATCTTTTTTAG... Gene: SSA_1881: hypothetical protein |
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hypothetical protein |
| glyQ |
Gene: SP_1475: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
*
Streptococcus gallolyticus UCN34 Site: position = -268 score = 49.88 sequence = AATACTCTTTAAAGA... Gene: GALLO_0391: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -341 score = 47.4 sequence = CTAAACTAGACTCTA... Gene: SDEG_1746: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
Gene: SSU05_1765: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -102 score = 19.94 sequence = ATAAAGGTGGAACCG... Gene: L101560: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
Gene: LACR_1196: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus uberis 0140J Site: position = -366 score = 53.56 sequence = TAAAATGGGTTTCAG... Gene: SUB1436: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus agalactiae 2603V/R Site: position = -272 score = 45.33 sequence = TACTGTCTCAGTAAG... Gene: SAG0268: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
Gene: SSA_1880: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus pyogenes M1 GAS Site: position = -341 score = 47.4 sequence = CTAAACTAGACTCTA... Gene: SPy1689: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus mutans UA159 Site: position = -415 score = 60.24 sequence = TGTTAAGAAAGAGAG... Gene: SMU.445: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus thermophilus CNRZ1066 Site: position = -233 score = 51.34 sequence = TGATAAGAAAGAAGA... Gene: str0505: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -255 score = 47.55 sequence = TAATCTTTTTTAGAA... Gene: SGO_0568: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -356 score = 60.12 sequence = TAAACTAACCAATAG... Gene: Sez_0486: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
Gene: smi_1396: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) |
| glyS |
Gene: SP_1474: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: GALLO_0392: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SDEG_1745: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SSU05_1764: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: L0360: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: LACR_1197: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SUB1435: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SAG0270: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SSA_1879: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SPy1688: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SMU.446: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: str0507: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: SGO_0569: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: Sez_0487: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Gene: smi_1395: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) |
| ylaC |
Gene: SP_1473: hypothetical protein |
Gene: GALLO_0393: hypothetical protein |
Gene: SDEG_1744: hypothetical protein |
Gene: SSU05_1763: hypothetical protein |
Gene: L104681: hypothetical protein |
Gene: LACR_1198: hypothetical protein |
Gene: SUB1434: hypothetical protein |
Gene: SAG0271: hypothetical protein |
Gene: SSA_1878: hypothetical protein |
Gene: SPy1687: hypothetical protein |
Gene: SMU.447: hypothetical protein |
Gene: str0508: hypothetical protein |
Gene: SGO_0570: hypothetical protein |
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Gene: smi_1394: hypothetical protein |
hypothetical protein |
| SAG0269 |
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Gene: SAG0269: FMN-dependent NADH-azoreductase |
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FMN-dependent NADH-azoreductase |
| SGO_2086 |
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*
Lactococcus lactis subsp. cremoris SK11 Site: position = -109 score = 18.86 sequence = ATAAAGGTGGAACCG... Gene: LACR_1195: hypothetical protein |
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Chromosome segregation ATPase |
| smi_1397 |
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*
Streptococcus mitis B6 Site: position = -231 score = 42.01 sequence = GTCAGCAGGAAAGAA... Gene: smi_1397: hypothetical protein |
hypothetical protein |
| ycfH |
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*
Streptococcus suis 05ZYH33 Site: position = -198 score = 46.83 sequence = AATACTAAGCATGAA... Gene: SSU05_1766: Phage envelope protein |
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hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |