Regulog T-box(Asp) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Asp-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Asp-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Streptococcus pneumoniae TIGR4 | ||
| Streptococcus gallolyticus UCN34 | ||
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Streptococcus suis 05ZYH33 | ||
| Lactococcus lactis subsp. lactis Il1403 | 3 | 1 |
| Lactococcus lactis subsp. cremoris SK11 | 3 | 1 |
| Streptococcus uberis 0140J | ||
| Streptococcus agalactiae 2603V/R | ||
| Streptococcus sanguinis SK36 | ||
| Streptococcus pyogenes M1 GAS | ||
| Streptococcus mutans UA159 | ||
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Streptococcus mitis B6 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| hisS |
Gene: SP_2121: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: GALLO_2209: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SDEG_2100: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SSU05_0278: Histidyl-tRNA synthetase (EC 6.1.1.21) |
*
Lactococcus lactis subsp. lactis Il1403 Site: position = -182 score = 31.43 sequence = GTTATAATCAATCTG... Gene: L0342: Histidyl-tRNA synthetase (EC 6.1.1.21) |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -182 score = 33.62 sequence = GTTATAATCAATTTG... Gene: LACR_2228: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SUB1794: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SAG2108: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SSA_2284: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SPy2157: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SMU.2102: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: str1971: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: SGO_2062: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: Sez_1893: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Gene: smi_0118: Histidyl-tRNA synthetase (EC 6.1.1.21) |
Histidyl-tRNA synthetase (EC 6.1.1.21) |
| yueA |
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Gene: L25433: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
Gene: LACR_2227: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
| aspS |
Gene: SP_2114: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: GALLO_2207: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SDEG_2099: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SSU05_2141: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: L0346: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: LACR_2226: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SUB1793: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SAG2107: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SSA_2270: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SPy2156: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SMU.2101: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: str1969: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: SGO_2060: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: Sez_1892: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Gene: smi_0127: Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Aspartyl-tRNA synthetase (EC 6.1.1.12) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |