Regulog Glycine - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Streptococcus pneumoniae TIGR4 | 1 | 1 |
| Streptococcus gallolyticus UCN34 | 1 | 1 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 1 | 1 |
| Streptococcus suis 05ZYH33 | 1 | 1 |
| Lactococcus lactis subsp. lactis Il1403 | ||
| Lactococcus lactis subsp. cremoris SK11 | ||
| Streptococcus uberis 0140J | 1 | 1 |
| Streptococcus agalactiae 2603V/R | 1 | 1 |
| Streptococcus sanguinis SK36 | 1 | 1 |
| Streptococcus pyogenes M1 GAS | 1 | 1 |
| Streptococcus mutans UA159 | 1 | 1 |
| Streptococcus thermophilus CNRZ1066 | 1 | 1 |
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | 1 | 1 |
| Streptococcus mitis B6 | 1 | 1 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| glyP |
*
Streptococcus pneumoniae TIGR4 Site: position = -178 score = 58.71 sequence = GACGGAACTCTGGAG... Gene: SP_0408: Sodium/glycine symporter GlyP |
*2
Streptococcus gallolyticus UCN34 Site: position = -398 score = 32.33 sequence = GATGTCATTCAGGAG... Site: position = -319 score = 54.51 sequence = GACGGACTTCTGGAG... Gene: GALLO_1191: Sodium/glycine symporter GlyP Gene: GALLO_1002: Sodium/glycine symporter GlyP |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -288 score = 23.51 sequence = GATGTCATGCAGGAG... Site: position = -206 score = 68.31 sequence = GACGGACTTCTGGAG... Gene: SDEG_1084: Sodium/glycine symporter GlyP |
*
Streptococcus suis 05ZYH33 Site: position = -210 score = 61.22 sequence = GACGGAACTCTGGAG... Gene: SSU05_0249: Sodium/glycine symporter GlyP |
|
|
*
Streptococcus uberis 0140J Site: position = -211 score = 66.9 sequence = GACGGACTTCTGGAG... Site: position = -291 score = 25.36 sequence = GATACCACACAGGAG... Gene: SUB0988: Sodium/glycine symporter GlyP |
*
Streptococcus agalactiae 2603V/R Site: position = -368 score = 30.91 sequence = GACGTCATTCAGGAG... Site: position = -288 score = 66.78 sequence = GACGGACTTCTGGAG... Gene: SAG1145: Sodium/glycine symporter GlyP |
*
Streptococcus sanguinis SK36 Site: position = -177 score = 60.03 sequence = GACGGAACTCTGGAG... Gene: SSA_0363: Sodium/glycine symporter GlyP |
*
Streptococcus pyogenes M1 GAS Site: position = -294 score = 22.54 sequence = GATGTCATGCAGGAG... Site: position = -213 score = 70.59 sequence = GACGGACTTCTGGAG... Gene: SPy1270: Sodium/glycine symporter GlyP |
*
Streptococcus mutans UA159 Site: position = -195 score = 65.04 sequence = GACGGACTTCTGGAG... Gene: SMU.1175: Sodium/glycine symporter GlyP |
*
Streptococcus thermophilus CNRZ1066 Site: position = -202 score = 65.64 sequence = TTGACGGACTTCTGG... Gene: str0984: Sodium/glycine symporter GlyP |
|
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -216 score = 67.37 sequence = TGGACGGGCTTCTGG... Site: position = -297 score = 22.99 sequence = ATGATGTCATGCAGG... Gene: Sez_0890: Sodium/glycine symporter GlyP |
*
Streptococcus mitis B6 Site: position = -180 score = 57.67 sequence = TGGACGGAACTCTGG... Gene: smi_1722: Sodium/glycine symporter GlyP |
Sodium/glycine symporter GlyP |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |