Regulog FruR - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Fructose utilization |
| Effector: | Fructose-1-phosphate; Fructose-1,6-diphosphate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FruR
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Fructose-1-phosphate
- By effector - Fructose-1,6-diphosphate
- By pathway - Fructose utilization
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 4 | 2 |
| Vibrio vulnificus CMCP6 | 4 | 2 |
| Vibrio harveyi ATCC BAA-1116 | 4 | 2 |
| Vibrio parahaemolyticus RIMD 2210633 | 4 | 2 |
| Vibrio shilonii AK1 | 4 | 2 |
| Vibrio splendidus LGP32 | 4 | 2 |
| Vibrio fischeri ES114 | 4 | 2 |
| Vibrio salmonicida LFI1238 | 4 | 2 |
| Vibrio angustum S14 | 4 | 2 |
| Photobacterium profundum SS9 | 4 | 2 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| fruB |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -266 score = 5.59133 sequence = GCTGAATCGATTCAGT Site: position = -244 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -117 score = 5.09707 sequence = GCTGAACCGATTCAGC Gene: VCA0518: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio vulnificus CMCP6 Site: position = -365 score = 5.19188 sequence = GCTGAAagGATTCAGC Site: position = -387 score = 5.59133 sequence = GCTGAATCGATTCAGt Site: position = -215 score = 5.17532 sequence = GCTGAATCGGTTCAGC Gene: VV20200: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -324 score = 5.0701 sequence = GCTGAACCGATTCAGT Site: position = -302 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -144 score = 5.61829 sequence = GCTGAATCGATTCAGC Gene: VIBHAR_05958: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -294 score = 5.0701 sequence = GCTGAACCGATTCAGT Site: position = -272 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -114 score = 5.59133 sequence = GCTGAATCGATTCAGT Gene: VPA0813: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio shilonii AK1 Site: position = -243 score = 5.14835 sequence = GCTGAATCGGTTCAGT Site: position = -221 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -75 score = 5.59133 sequence = GCTGAATCGATTCAGT Gene: VSAK1_22769: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio splendidus LGP32 Site: position = -320 score = 5.59133 sequence = GCTGAATCGATTCAGT Site: position = -298 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -109 score = 5.09707 sequence = GCTGAACCGATTCAGC Gene: VS_II1032: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio fischeri ES114 Site: position = -212 score = 5.59133 sequence = GCTGAATCGATTCAGT Site: position = -190 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -81 score = 5.59133 sequence = GCTGAATCGATTCAGT Gene: VF_A0942: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio salmonicida LFI1238 Site: position = -198 score = 5.59133 sequence = GCTGAATCGTTTCAGT Site: position = -176 score = 5.19188 sequence = GCTGAAAGGATTCAGC Site: position = -70 score = 5.51014 sequence = GCTGAAACGATTCAGC Gene: VSAL_II0090: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Vibrio angustum S14 Site: position = -127 score = 4.76702 sequence = ACTGAAAGGTTTCAGC Site: position = -52 score = 5.51014 sequence = GCTGAAACGATTCAGC Site: position = -149 score = 5.48318 sequence = GCTGAAACGATTCAGT Gene: VAS14_01981: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
*
Photobacterium profundum SS9 Site: position = -240 score = 5.48318 sequence = GCTGAAACGATTCAGT Site: position = -218 score = 5.19188 sequence = GCTGAAAGGTTTCAGC Site: position = -151 score = 5.51014 sequence = GCTGAAACGATTCAGC Gene: PBPRA1573: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) |
| fruK |
Gene: VCA0517: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VV20199: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VIBHAR_05959: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VPA0812: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VSAK1_22764: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VS_II1033: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VF_A0941: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VSAL_II0091: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: VAS14_01986: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: PBPRA1574: 1-phosphofructokinase (EC 2.7.1.56) |
1-phosphofructokinase (EC 2.7.1.56) |
| fruA |
Gene: VCA0516: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VV20198: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VIBHAR_05960: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VPA0811: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VSAK1_22759: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VS_II1034: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VF_A0940: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VSAL_II0092: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: VAS14_01991: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
Gene: PBPRA1575: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
| CRON 2. | |||||||||||
| fruR |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -237 score = 5.17532 sequence = GCTGAATCGGTTCAGC Site: position = -110 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -88 score = 5.19342 sequence = ACTGAATCGATTCAGC Gene: VCA0519: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio vulnificus CMCP6 Site: position = -258 score = 5.09707 sequence = GCTGAACCGATTCAGC Site: position = -108 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -86 score = 5.19342 sequence = ACTGAATCGATTCAGC Gene: VV20201: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -266 score = 5.61829 sequence = GCTGAATCGATTCAGC Site: position = -108 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -86 score = 4.75045 sequence = ACTGAATCGGTTCAGC Gene: VIBHAR_05957: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -266 score = 5.19342 sequence = ACTGAATCGATTCAGC Site: position = -108 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -86 score = 4.75045 sequence = ACTGAATCGGTTCAGC Gene: VPA0814: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio shilonii AK1 Site: position = -84 score = 4.6722 sequence = ACTGAACCGATTCAGC Site: position = -252 score = 5.19342 sequence = ACTGAATCGATTCAGC Site: position = -106 score = 5.12597 sequence = GCTGAATCCTTTCAGC Gene: VSAK1_22774: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio splendidus LGP32 Site: position = 72 score = 5.19342 sequence = ACTGAATCGATTCAGC Site: position = 50 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -139 score = 5.17532 sequence = GCTGAATCGGTTCAGC Gene: VS_II1031: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio fischeri ES114 Site: position = -220 score = 5.19342 sequence = ACTGAATCGATTCAGC Site: position = -111 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -89 score = 5.19342 sequence = ACTGAATCGATTCAGC Gene: VF_A0943: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio salmonicida LFI1238 Site: position = -216 score = 5.61829 sequence = GCTGAATCGTTTCAGC Site: position = -110 score = 5.12597 sequence = GCTGAATCCTTTCAGC Site: position = -88 score = 5.08527 sequence = ACTGAAACGATTCAGC Gene: VSAL_II0089: Fructose operon transcriptional regulator FruR, LacI family |
*
Vibrio angustum S14 Site: position = -195 score = 4.99085 sequence = GCTGAAACCTTTCAGT Site: position = -270 score = 5.61829 sequence = GCTGAATCGTTTCAGC Site: position = -173 score = 5.19342 sequence = ACTGAATCGTTTCAGC Gene: VAS14_01976: Fructose operon transcriptional regulator FruR, LacI family |
*
Photobacterium profundum SS9 Site: position = -205 score = 5.61829 sequence = GCTGAATCGTTTCAGC Site: position = -138 score = 5.01782 sequence = GCTGAAACCTTTCAGC Site: position = -116 score = 5.19342 sequence = ACTGAATCGTTTCAGC Gene: PBPRA1572: Fructose operon transcriptional regulator FruR, LacI family |
Fructose operon transcriptional regulator FruR, LacI family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |