Statistics of regulated genes

Genome	Genes	Operons
Rhodobacter sphaeroides 2.4.1	4	1
Paracoccus denitrificans PD1222	5	2
Jannaschia sp. CCS1	4	1
Rhodobacterales bacterium HTCC2654	5	2
Oceanicola granulosus HTCC2516	1	1
Loktanella vestfoldensis SKA53	4	1
Oceanicola batsensis HTCC2597	4	1
Roseovarius nubinhibens ISM	1	1
Roseovarius sp. 217	4	1
Sulfitobacter sp. EE-36	5	2
Silicibacter TM1040	5	2
Silicibacter pomeroyi DSS-3	5	2
Roseobacter sp. MED193	5	2
Hyphomonas neptunium ATCC 15444
Oceanicaulis alexandrii HTCC2633

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
mur	Rhodobacter sphaeroides 2.4.1 Gene: RSP_2494: Manganese uptake regulation protein Mur	* Paracoccus denitrificans PD1222 Site: position = -35 score = 4.55567 sequence = GTTGCAATTTCTTCGCATC Site: position = -64 score = 4.58971 sequence = TCTGCGAACCATTCTCAAC Gene: Pden_1260: Manganese uptake regulation protein Mur	Jannaschia sp. CCS1 Gene: Jann_1799: Manganese uptake regulation protein Mur	* Rhodobacterales bacterium HTCC2654 Site: position = -79 score = 5.65599 sequence = AGTGCAAATCATTTGCAAC Site: position = -127 score = 5.36051 sequence = GTTGCGAATGAATTGCAAC Gene: RB2654_19538: Manganese uptake regulation protein Mur	Oceanicola granulosus HTCC2516 Gene: OG2516_03730: Manganese uptake regulation protein Mur	Loktanella vestfoldensis SKA53 Gene: SKA53_03101: Manganese uptake regulation protein Mur	Oceanicola batsensis HTCC2597 Gene: OB2597_02997: Manganese uptake regulation protein Mur	Roseovarius nubinhibens ISM Gene: ISM_15430: Manganese uptake regulation protein Mur	Roseovarius sp. 217 Gene: ROS217_18337: Manganese uptake regulation protein Mur	* Sulfitobacter sp. EE-36 Site: position = -109 score = 4.9676 sequence = AATGCGAATTAGTCGCATA Gene: EE36_12413: Manganese uptake regulation protein Mur	Silicibacter TM1040 Gene: TM1040_0928: Manganese uptake regulation protein Mur	Silicibacter pomeroyi DSS-3 Gene: SPO2477: Manganese uptake regulation protein Mur	Roseobacter sp. MED193 Gene: MED193_22541: Manganese uptake regulation protein Mur	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Manganese uptake regulation protein Mur
CRON 2.
mntX	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	* Oceanicola granulosus HTCC2516 Site: position = -39 score = 5.89626 sequence = ATTGCGAATTATTCGCAAT Gene: OG2516_13601: Predicted manganese transporter	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	* Roseovarius nubinhibens ISM Site: position = -29 score = 5.66528 sequence = ATTGAGAATAATTCGCAAT Gene: ISM_02005: Predicted manganese transporter	Roseovarius sp. 217	Sulfitobacter sp. EE-36	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Predicted manganese transporter
CRON 3.
irr	Rhodobacter sphaeroides 2.4.1 Gene: RSP_3179: Iron-responsive regulator Irr	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1 Gene: Jann_1652: Iron-responsive regulator Irr	Rhodobacterales bacterium HTCC2654 Gene: RB2654_18263: Iron-responsive regulator Irr	Oceanicola granulosus HTCC2516 Gene: OG2516_14758: Iron-responsive regulator Irr	Loktanella vestfoldensis SKA53 Gene: SKA53_01126: Iron-responsive regulator Irr	Oceanicola batsensis HTCC2597 Gene: OB2597_14726: Iron-responsive regulator Irr	Roseovarius nubinhibens ISM Gene: ISM_00785: Iron-responsive regulator Irr	Roseovarius sp. 217 Gene: ROS217_15500: Iron-responsive regulator Irr	Sulfitobacter sp. EE-36 Gene: EE36_03493: Iron-responsive regulator Irr	* Silicibacter TM1040 Site: position = -75 score = 4.50817 sequence = TTTGCAAATCCGTTTGAAA Gene: TM1040_0183: Iron-responsive regulator Irr	* Silicibacter pomeroyi DSS-3 Site: position = -76 score = 4.17127 sequence = GATGAGAATGAAATTCATT Gene: SPOA0445: Iron-responsive regulator Irr	* Roseobacter sp. MED193 Site: position = -40 score = 5.0197 sequence = AATGCAATTCATTCGCAGT Gene: MED193_17849: Iron-responsive regulator Irr	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Iron-responsive regulator Irr
CRON 4.
sitA	* Rhodobacter sphaeroides 2.4.1 Site: position = -40 score = 5.22929 sequence = TTTGCGAATGCCTCGCATT Gene: RSP_0904: Manganese ABC transporter, periplasmic-binding protein SitA	* Paracoccus denitrificans PD1222 Site: position = -89 score = 4.55567 sequence = GATGCGAAGAAATTGCAAC Site: position = -60 score = 4.58971 sequence = GTTGAGAATGGTTCGCAGA Gene: Pden_1259: Manganese ABC transporter, periplasmic-binding protein SitA	* Jannaschia sp. CCS1 Site: position = -88 score = 5.0211 sequence = TTTGCAACTCACTCGCAAG Site: position = -58 score = 4.74288 sequence = CTTGCGAATAAGTCGCATA Gene: Jann_2080: Manganese ABC transporter, periplasmic-binding protein SitA	* Rhodobacterales bacterium HTCC2654 Site: position = -117 score = 5.36051 sequence = GTTGCAATTCATTCGCAAC Site: position = -165 score = 5.65599 sequence = GTTGCAAATGATTTGCACT Gene: RB2654_19543: Manganese ABC transporter, periplasmic-binding protein SitA	Oceanicola granulosus HTCC2516	* Loktanella vestfoldensis SKA53 Site: position = -63 score = 4.88858 sequence = GTTGCGAACGCTTCTCATT Gene: SKA53_08116: Manganese ABC transporter, periplasmic-binding protein SitA	* Oceanicola batsensis HTCC2597 Site: position = -91 score = 5.46258 sequence = GTTGCGAATGGTTCGCATT Site: position = -60 score = 5.28141 sequence = GTTGCGAATGGTTCGCATC Gene: OB2597_13568: Manganese ABC transporter, periplasmic-binding protein SitA	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -28 score = 5.11613 sequence = GTTGCGAATAATTCTCATA Gene: ROS217_05129: Manganese ABC transporter, periplasmic-binding protein SitA	* Sulfitobacter sp. EE-36 Site: position = -110 score = 4.9676 sequence = TATGCGACTAATTCGCATT Gene: EE36_12418: Manganese ABC transporter, periplasmic-binding protein SitA	* Silicibacter TM1040 Site: position = -95 score = 4.50626 sequence = TGTGAGAATAATTCTCATT Site: position = -64 score = 4.66368 sequence = GTTGCGAAGCGTTCTCATA Gene: TM1040_0098: Manganese ABC transporter, periplasmic-binding protein SitA	* Silicibacter pomeroyi DSS-3 Site: position = -84 score = 5.29749 sequence = CTTGCGAATAATTCTCAAT Site: position = -53 score = 5.0067 sequence = GTTGCGAATGGTTCTCATA Gene: SPO3366: Manganese ABC transporter, periplasmic-binding protein SitA	* Roseobacter sp. MED193 Site: position = -56 score = 4.77572 sequence = GTTGAGAATCGTTCTCATA Site: position = -87 score = 5.11006 sequence = GTTGAGAATAATTCTCATT Gene: MED193_12968: Manganese ABC transporter, periplasmic-binding protein SitA	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Manganese ABC transporter, periplasmic-binding protein SitA
sitB	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0905: Manganese ABC transporter, ATP-binding protein SitB	Paracoccus denitrificans PD1222 Gene: Pden_1258: Manganese ABC transporter, ATP-binding protein SitB	Jannaschia sp. CCS1 Gene: Jann_2081: Manganese ABC transporter, ATP-binding protein SitB	Rhodobacterales bacterium HTCC2654 Gene: RB2654_19548: Manganese ABC transporter, ATP-binding protein SitB	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53 Gene: SKA53_08121: Manganese ABC transporter, ATP-binding protein SitB	Oceanicola batsensis HTCC2597 Gene: OB2597_13573: Manganese ABC transporter, ATP-binding protein SitB	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_05124: Manganese ABC transporter, ATP-binding protein SitB	Sulfitobacter sp. EE-36 Gene: EE36_12423: Manganese ABC transporter, ATP-binding protein SitB	Silicibacter TM1040 Gene: TM1040_0099: Manganese ABC transporter, ATP-binding protein SitB	Silicibacter pomeroyi DSS-3 Gene: SPO3365: Manganese ABC transporter, ATP-binding protein SitB	Roseobacter sp. MED193 Gene: MED193_12963: Manganese ABC transporter, ATP-binding protein SitB	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Manganese ABC transporter, ATP-binding protein SitB
sitC	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0906: Manganese ABC transporter, inner membrane permease protein SitC	Paracoccus denitrificans PD1222 Gene: Pden_1257: Manganese ABC transporter, inner membrane permease protein SitC	Jannaschia sp. CCS1 Gene: Jann_2082: Manganese ABC transporter, inner membrane permease protein SitC	Rhodobacterales bacterium HTCC2654 Gene: RB2654_19553: Manganese ABC transporter, inner membrane permease protein SitC	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53 Gene: SKA53_08126: Manganese ABC transporter, inner membrane permease protein SitC	Oceanicola batsensis HTCC2597 Gene: OB2597_13578: Manganese ABC transporter, inner membrane permease protein SitC	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_05119: Manganese ABC transporter, inner membrane permease protein SitC	Sulfitobacter sp. EE-36 Gene: EE36_12428: Manganese ABC transporter, inner membrane permease protein SitC	Silicibacter TM1040 Gene: TM1040_0100: Manganese ABC transporter, inner membrane permease protein SitC	Silicibacter pomeroyi DSS-3 Gene: SPO3364: Manganese ABC transporter, inner membrane permease protein SitC	Roseobacter sp. MED193 Gene: MED193_12958: Manganese ABC transporter, inner membrane permease protein SitC	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Manganese ABC transporter, inner membrane permease protein SitC
sitD	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0908: Manganese ABC transporter, inner membrane permease protein SitD	Paracoccus denitrificans PD1222 Gene: Pden_1256: Manganese ABC transporter, inner membrane permease protein SitD	Jannaschia sp. CCS1 Gene: Jann_2083: Manganese ABC transporter, inner membrane permease protein SitD	Rhodobacterales bacterium HTCC2654 Gene: RB2654_19558: Manganese ABC transporter, inner membrane permease protein SitD	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53 Gene: SKA53_08131: Manganese ABC transporter, inner membrane permease protein SitD	Oceanicola batsensis HTCC2597 Gene: OB2597_13583: Manganese ABC transporter, inner membrane permease protein SitD	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_05114: Manganese ABC transporter, inner membrane permease protein SitD	Sulfitobacter sp. EE-36 Gene: EE36_12433: Manganese ABC transporter, inner membrane permease protein SitD	Silicibacter TM1040 Gene: TM1040_0101: Manganese ABC transporter, inner membrane permease protein SitD	Silicibacter pomeroyi DSS-3 Gene: SPO3363: Manganese ABC transporter, inner membrane permease protein SitD	Roseobacter sp. MED193 Gene: MED193_12953: Manganese ABC transporter, inner membrane permease protein SitD	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Manganese ABC transporter, inner membrane permease protein SitD

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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