Regulog GlcC - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Glycolate utilization |
| Effector: | Glycolate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - GlcC
- By TF family - GntR/Others
- By effector - Glycolate
- By pathway - Glycolate utilization
| Genome | Genes | Operons |
|---|---|---|
| Rhodobacter sphaeroides 2.4.1 | ||
| Paracoccus denitrificans PD1222 | 3 | 1 |
| Jannaschia sp. CCS1 | ||
| Rhodobacterales bacterium HTCC2654 | ||
| Oceanicola granulosus HTCC2516 | ||
| Loktanella vestfoldensis SKA53 | ||
| Oceanicola batsensis HTCC2597 | ||
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | ||
| Sulfitobacter sp. EE-36 | ||
| Silicibacter TM1040 | ||
| Silicibacter pomeroyi DSS-3 | ||
| Roseobacter sp. MED193 | ||
| Hyphomonas neptunium ATCC 15444 | ||
| Oceanicaulis alexandrii HTCC2633 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| glcD |
Gene: RSP_1020: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
*
Paracoccus denitrificans PD1222 Site: position = -71 score = 6.09976 sequence = ATGTGGTCTGAAAATTATACCAAGA Gene: Pden_4399: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Jann_0690: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: RB2654_17716: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: OG2516_16881: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: SKA53_15141: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: OB2597_12136: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: ISM_09030: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: ROS217_09005: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: EE36_08128: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: TM1040_2502: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: SPO3478: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: MED193_15702: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
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Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
| glcE |
Gene: RSP_1019: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Pden_4398: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Jann_0691: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: RB2654_17721: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: OG2516_16876: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: SKA53_15136: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: OB2597_12141: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: ISM_09025: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: ROS217_09000: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: EE36_08133: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: TM1040_2501: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: SPO3479: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: MED193_15707: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
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Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
| glcF |
Gene: RSP_1018: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Pden_4397: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Jann_0693: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: RB2654_17726: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: OG2516_16871: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: SKA53_15131: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: OB2597_12151: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: ISM_09020: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: ROS217_08995: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: EE36_08143: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: TM1040_2500: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: SPO3480: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: MED193_15712: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
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Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |