Regulog NagQ - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Phylum:	Proteobacteria/beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 7 sites [see more]

Member of regulog collections

By trascription factor - NagQ
By taxonomy - Burkholderia
By TF family - GntR/Others
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia pseudomallei K96243	5	1
Burkholderia mallei ATCC 23344	5	1
Burkholderia sp. 383	5	1
Burkholderia cepacia AMMD	5	1
Burkholderia vietnamiensis G4	5	1
Burkholderia glumae BGR1
Burkholderia xenovorans LB400	5	1
Burkholderia phymatum STM815	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
nagQ	* Burkholderia pseudomallei K96243 Site: position = -52 score = 5.64085 sequence = TGGTATTATTTTGGTTAT Gene: BPSL0495: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	* Burkholderia mallei ATCC 23344 Site: position = -82 score = 5.64085 sequence = TGGTATTATTTTGGTTAT Gene: BMA3168: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	* Burkholderia sp. 383 Site: position = -71 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bcep18194_A6155: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	* Burkholderia cepacia AMMD Site: position = -71 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bamb_2885: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	* Burkholderia vietnamiensis G4 Site: position = -72 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bcep1808_2929: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	Burkholderia glumae BGR1	* Burkholderia xenovorans LB400 Site: position = -74 score = 5.13029 sequence = TGGTATTATGTTGGTTAT Gene: Bxe_A4156: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	* Burkholderia phymatum STM815 Site: position = -81 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bphy_0292: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family	Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family
nagA	Burkholderia pseudomallei K96243 Gene: BPSL0496: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia mallei ATCC 23344 Gene: BMA3168.1: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia sp. 383 Gene: Bcep18194_A6154: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia cepacia AMMD Gene: Bamb_2884: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia vietnamiensis G4 Gene: Bcep1808_2928: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia glumae BGR1 Gene: bglu_1g31520: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia xenovorans LB400 Gene: Bxe_A4155: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Burkholderia phymatum STM815 Gene: Bphy_0293: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB2	Burkholderia pseudomallei K96243 Gene: BPSL0497: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia mallei ATCC 23344 Gene: BMA3170: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia sp. 383 Gene: Bcep18194_A6153: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia cepacia AMMD Gene: Bamb_2883: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia vietnamiensis G4 Gene: Bcep1808_2927: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia glumae BGR1 Gene: bglu_1g31510: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia xenovorans LB400 Gene: Bxe_A4154: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Burkholderia phymatum STM815 Gene: Bphy_0294: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
ptsI	Burkholderia pseudomallei K96243 Gene: BPSL0498: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia mallei ATCC 23344 Gene: BMA3171: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia sp. 383 Gene: Bcep18194_A6152: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia cepacia AMMD Gene: Bamb_2882: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia vietnamiensis G4 Gene: Bcep1808_2926: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia glumae BGR1 Gene: bglu_1g31500: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia xenovorans LB400 Gene: Bxe_A4153: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Burkholderia phymatum STM815 Gene: Bphy_0295: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
nagE	Burkholderia pseudomallei K96243 Gene: BPSL0499: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia mallei ATCC 23344 Gene: BMA3172: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia sp. 383 Gene: Bcep18194_A6151: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia cepacia AMMD Gene: Bamb_2881: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia vietnamiensis G4 Gene: Bcep1808_2925: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia glumae BGR1 Gene: bglu_1g31490: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia xenovorans LB400 Gene: Bxe_A4152: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Burkholderia phymatum STM815 Gene: Bphy_0296: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NagQ - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --