Regulog NagQ - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagQ
- By taxonomy - Burkholderia
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia pseudomallei K96243 | 5 | 1 |
| Burkholderia mallei ATCC 23344 | 5 | 1 |
| Burkholderia sp. 383 | 5 | 1 |
| Burkholderia cepacia AMMD | 5 | 1 |
| Burkholderia vietnamiensis G4 | 5 | 1 |
| Burkholderia glumae BGR1 | ||
| Burkholderia xenovorans LB400 | 5 | 1 |
| Burkholderia phymatum STM815 | 5 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| nagQ |
*
Burkholderia pseudomallei K96243 Site: position = -52 score = 5.64085 sequence = TGGTATTATTTTGGTTAT Gene: BPSL0495: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Burkholderia mallei ATCC 23344 Site: position = -82 score = 5.64085 sequence = TGGTATTATTTTGGTTAT Gene: BMA3168: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Burkholderia sp. 383 Site: position = -71 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bcep18194_A6155: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Burkholderia cepacia AMMD Site: position = -71 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bamb_2885: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Burkholderia vietnamiensis G4 Site: position = -72 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bcep1808_2929: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
|
*
Burkholderia xenovorans LB400 Site: position = -74 score = 5.13029 sequence = TGGTATTATGTTGGTTAT Gene: Bxe_A4156: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Burkholderia phymatum STM815 Site: position = -81 score = 4.87329 sequence = TGGTATTATGGTGGTTAT Gene: Bphy_0292: Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
Ttranscriptional regulator of N-Acetylglucosamine utilization, GntR family |
| nagA |
Gene: BPSL0496: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: BMA3168.1: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Bcep18194_A6154: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Bamb_2884: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Bcep1808_2928: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: bglu_1g31520: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Bxe_A4155: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Bphy_0293: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| nagB2 |
Gene: BPSL0497: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: BMA3170: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Bcep18194_A6153: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Bamb_2883: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Bcep1808_2927: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: bglu_1g31510: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Bxe_A4154: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Bphy_0294: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
| ptsI |
Gene: BPSL0498: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: BMA3171: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Bcep18194_A6152: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Bamb_2882: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Bcep1808_2926: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: bglu_1g31500: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Bxe_A4153: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Bphy_0295: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
| nagE |
Gene: BPSL0499: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: BMA3172: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Bcep18194_A6151: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Bamb_2881: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Bcep1808_2925: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: bglu_1g31490: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Bxe_A4152: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Bphy_0296: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |