Regulog NagQ - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagQ
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Pseudomonas aeruginosa PAO1 | 5 | 1 |
| Pseudomonas entomophila L48 | ||
| Pseudomonas putida KT2440 | ||
| Pseudomonas syringae pv. tomato str. DC3000 | ||
| Pseudomonas fluorescens Pf-5 | 5 | 1 |
| Pseudomonas mendocina ymp | ||
| Pseudomonas stutzeri A1501 | ||
| Azotobacter vinelandii AvOP |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| nagQ |
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Pseudomonas aeruginosa PAO1 Site: position = -82 score = 5.32074 sequence = TGGCATTGACGTGGTATT Site: position = -71 score = 5.45379 sequence = TGGTATTCAAGTGGTATT Gene: PA3757: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
Gene: PSEEN4379: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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Pseudomonas fluorescens Pf-5 Site: position = -86 score = 4.62439 sequence = TGGCGTTGACATGGTATC Site: position = -75 score = 5.51701 sequence = TGGTATCTAAGTGGTATT Gene: PFL_1082: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
| nagA |
Gene: PA3758: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: PSEEN4380: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Gene: PFL_1081: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| nagB2 |
Gene: PA3759: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: PSEEN4381: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
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Gene: PFL_1080: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
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Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
| ptsI |
Gene: PA3760: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: PSEEN4382: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
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Gene: PFL_1079: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
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PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
| nagE |
Gene: PA3761: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: PSEEN4383: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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Gene: PFL_1078: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |