Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NagQ - Pseudomonadaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudomonas aeruginosa PAO1 5 1
Pseudomonas entomophila L48
Pseudomonas putida KT2440
Pseudomonas syringae pv. tomato str. DC3000
Pseudomonas fluorescens Pf-5 5 1
Pseudomonas mendocina ymp
Pseudomonas stutzeri A1501
Azotobacter vinelandii AvOP
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nagQ
*
Pseudomonas aeruginosa PAO1

Site:
position = -82
score = 5.32074
sequence = TGGCATTGACGTGGTATT

Site:
position = -71
score = 5.45379
sequence = TGGTATTCAAGTGGTATT

Gene: PA3757: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Pseudomonas entomophila L48

Gene: PSEEN4379: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -86
score = 4.62439
sequence = TGGCGTTGACATGGTATC

Site:
position = -75
score = 5.51701
sequence = TGGTATCTAAGTGGTATT

Gene: PFL_1082: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
nagA
 
Pseudomonas aeruginosa PAO1

Gene: PA3758: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Pseudomonas entomophila L48

Gene: PSEEN4380: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_1081: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB2
 
Pseudomonas aeruginosa PAO1

Gene: PA3759: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Pseudomonas entomophila L48

Gene: PSEEN4381: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_1080: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
ptsI
 
Pseudomonas aeruginosa PAO1

Gene: PA3760: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Pseudomonas entomophila L48

Gene: PSEEN4382: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_1079: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
nagE
 
Pseudomonas aeruginosa PAO1

Gene: PA3761: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Pseudomonas entomophila L48

Gene: PSEEN4383: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_1078: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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