Regulog HypR - Ralstonia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Phylum:	Proteobacteria/beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
COG2271 (UhpC)	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	* Ralstonia metallidurans CH34 Site: position = -84 score = 4.22716 sequence = GTTGTATAAAAT Gene: Rmet_5098: Transporter, MFS superfamily	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Transporter, MFS superfamily

CRON 2.
hypD	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	* Ralstonia metallidurans CH34 Site: position = -117 score = 4.94466 sequence = ATTTTATACAAT Gene: Rmet_5097: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
hypH-related(2), COG1012 (PutA)	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	Ralstonia metallidurans CH34 Gene: Rmet_5096: Putative ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Putative ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
hypS	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	Ralstonia metallidurans CH34 Gene: Rmet_5095: Putative L-lactate/Malate dehydrogenase	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Putative L-lactate/Malate dehydrogenase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --