Regulog HutC - Xanthomonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Genome | Genes | Operons |
|---|---|---|
| Xylella fastidiosa 9a5c | ||
| Xanthomonas axonopodis pv. citri str. 306 | 5 | 2 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 6 | 2 |
| Stenotrophomonas maltophilia K279a | 6 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| hutI |
|
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -39 score = 4.61174 sequence = TCTATTGTATATACATATCA Gene: XAC1638: Imidazolonepropionase (EC 3.5.2.7) |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -39 score = 4.61174 sequence = TCTATTGTATATACATATCA Gene: XCC1581: Imidazolonepropionase (EC 3.5.2.7) |
*
Stenotrophomonas maltophilia K279a Site: position = -33 score = 4.96687 sequence = TATATTGTATAGACATATAA Gene: Smlt3107: Imidazolonepropionase (EC 3.5.2.7) |
Imidazolonepropionase (EC 3.5.2.7) |
| hutH |
|
Gene: XAC1637: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: XCC1579: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: Smlt3108: Histidine ammonia-lyase (EC 4.3.1.3) |
Histidine ammonia-lyase (EC 4.3.1.3) |
| hutG |
|
Gene: XAC1636: N-formylglutamate deformylase (EC 3.5.1.68) |
Gene: XCC1578: N-formylglutamate deformylase (EC 3.5.1.68) |
Gene: Smlt3109: N-formylglutamate deformylase (EC 3.5.1.68) |
N-formylglutamate deformylase (EC 3.5.1.68) |
| hutU |
|
Gene: XAC1635: Urocanate hydratase (EC 4.2.1.49) |
Gene: XCC1577: Urocanate hydratase (EC 4.2.1.49) |
Gene: Smlt3110: Urocanate hydratase (EC 4.2.1.49) |
Urocanate hydratase (EC 4.2.1.49) |
| CRON 2. | |||||
| hutF |
|
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -56 score = 4.38323 sequence = TGATATGTATATACAATAGA Gene: XAC1639: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -56 score = 4.38323 sequence = TGATATGTATATACAATAGA Gene: XCC1580: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
*
Stenotrophomonas maltophilia K279a Site: position = -45 score = 4.32863 sequence = TTATATGTCTATACAATATA Gene: Smlt3106: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
| hutC |
|
Gene: XAC1640: Histidine utilization repressor |
Gene: XCC1582: Histidine utilization repressor |
Gene: Smlt3105: Histidine utilization repressor |
Histidine utilization repressor |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |