Regulog HutC - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | 6 | 3 |
| Psychromonas sp. CNPT3 | ||
| Moritella sp. PE36 | 5 | 2 |
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 4 | 1 |
| Aeromonas salmonicida subsp. salmonicida A449 | 5 | 2 |
| Tolumonas auensis DSM 9187 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| hutC |
*
Psychromonas ingrahamii 37 Site: position = -44 score = 5.20457 sequence = TTATTTGTATAGTCAATTAA Gene: Ping_1033: Histidine utilization repressor, GntR family |
|
*
Moritella sp. PE36 Site: position = -80 score = 4.67654 sequence = TCATTTGTATAGTCAATTAA Gene: PE36_09016: Histidine utilization repressor, GntR family |
Gene: AHA_0376: Histidine utilization repressor, GntR family |
Gene: ASA_3956: Histidine utilization repressor, GntR family |
|
Histidine utilization repressor, GntR family |
| CRON 2. | |||||||
| COG3314 |
*
Psychromonas ingrahamii 37 Site: position = -95 score = 4.56151 sequence = TTAAATGTATACACATTTTA Site: position = -232 score = 5.26566 sequence = TATTGTGTATATACAATTAT Gene: Ping_1950: Predicted histidine uptake transporter |
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|
|
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -61 score = 4.92606 sequence = AGCATTGTATATACAATTCG Gene: ASA_2086: Predicted histidine uptake transporter |
|
Predicted histidine uptake transporter |
| CRON 3. | |||||||
| hutI |
*
Psychromonas ingrahamii 37 Site: position = -35 score = 5.70991 sequence = CTAATTGTATATACATTTAA Gene: Ping_1032: Imidazolonepropionase (EC 3.5.2.7) |
|
*
Moritella sp. PE36 Site: position = -35 score = 5.91618 sequence = TTAATTGTATATACATTTAA Gene: PE36_09011: Imidazolonepropionase (EC 3.5.2.7) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -90 score = 4.93773 sequence = TTAATTGTATATACAAACTC Gene: AHA_0377: Imidazolonepropionase (EC 3.5.2.7) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -28 score = 4.59091 sequence = GATAATGTATATACATTTAG Site: position = -159 score = 5.22194 sequence = TTAATTGTATATACATATTG Gene: ASA_3955: Imidazolonepropionase (EC 3.5.2.7) |
|
Imidazolonepropionase (EC 3.5.2.7) |
| hutG2 |
Gene: Ping_1031: Formiminoglutamase (EC 3.5.3.8) |
|
Gene: PE36_09006: Formiminoglutamase (EC 3.5.3.8) |
Gene: AHA_0378: Formiminoglutamase (EC 3.5.3.8) |
Gene: ASA_3954: Formiminoglutamase (EC 3.5.3.8) |
|
Formiminoglutamase (EC 3.5.3.8) |
| hutU |
Gene: Ping_1030: Urocanate hydratase (EC 4.2.1.49) |
|
Gene: PE36_09001: Urocanate hydratase (EC 4.2.1.49) |
Gene: AHA_0379: Urocanate hydratase (EC 4.2.1.49) |
Gene: ASA_3953: Urocanate hydratase (EC 4.2.1.49) |
|
Urocanate hydratase (EC 4.2.1.49) |
| hutH |
Gene: Ping_1029: Histidine ammonia-lyase (EC 4.3.1.3) |
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Gene: PE36_08996: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: AHA_0380: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: ASA_3952: Histidine ammonia-lyase (EC 4.3.1.3) |
|
Histidine ammonia-lyase (EC 4.3.1.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |