Regulog PrpR - Moraxellaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Moraxellaceae
- By trascription factor - PrpR
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
| Genome | Genes | Operons |
|---|---|---|
| Acinetobacter sp. ADP1 | 4 | 1 |
| Acinetobacter baumannii AB0057 | 4 | 1 |
| Psychrobacter arcticum 273-4 | ||
| Psychrobacter sp. PRwf-1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| prpR |
*
Acinetobacter sp. ADP1 Site: position = -142 score = 5.37094 sequence = ATTGTCAACAAT Site: position = -12 score = 5.82454 sequence = ATTGTCGACAAT Gene: ACIAD2759: Propionate catabolism transcriptional regulator, GntR family |
*
Acinetobacter baumannii AB0057 Site: position = -75 score = 4.82561 sequence = AGTGTCAACAAT Site: position = -291 score = 5.28588 sequence = ATTGTCTACAAT Site: position = -12 score = 5.82454 sequence = ATTGTCGACAAT Gene: AB57_0121: Propionate catabolism transcriptional regulator, GntR family |
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Propionate catabolism transcriptional regulator, GntR family |
| prpB |
Gene: ACIAD2758: Methylisocitrate lyase (EC 4.1.3.30) |
Gene: AB57_0122: Methylisocitrate lyase (EC 4.1.3.30) |
Gene: Psyc_1110: Methylisocitrate lyase (EC 4.1.3.30) |
Gene: PsycPRwf_1197: Methylisocitrate lyase (EC 4.1.3.30) |
Methylisocitrate lyase (EC 4.1.3.30) |
| prpC |
Gene: ACIAD2756: 2-methylcitrate synthase (EC 2.3.3.5) |
Gene: AB57_0123: 2-methylcitrate synthase (EC 2.3.3.5) |
Gene: Psyc_1111: 2-methylcitrate synthase (EC 2.3.3.5) |
Gene: PsycPRwf_1198: 2-methylcitrate synthase (EC 2.3.3.5) |
2-methylcitrate synthase (EC 2.3.3.5) |
| acnD |
Gene: ACIAD2755: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
Gene: AB57_0124: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
Gene: Psyc_1112: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
Gene: PsycPRwf_1199: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |