Regulog NorR - Oceanospirillales/Alteromonadales
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - NorR
- By TF family - Fis
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Genome | Genes | Operons |
|---|---|---|
| Hahella chejuensis KCTC 2396 | 7 | 4 |
| Marinobacter aqueolei | ||
| Marinobacter sp. ELB17 | ||
| Oceanobacter sp. RED65 | ||
| Oceanospirillum sp. MED92 | ||
| Marinomonas sp. MWYL1 | 2 | 2 |
| Saccharophagus degradans 2-40 | ||
| Teredinibacter turnerae T7901 | 2 | 2 |
| Cellvibrio japonicus Ueda107 | ||
| Chromohalobacter salexigens DSM 3043 | 2 | 2 |
| Reinekea sp. MED297 | ||
| Alcanivorax borkumensis SK2 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| HCH_01372 |
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Hahella chejuensis KCTC 2396 Site: position = -158 score = 4.86364 sequence = ACATGTCTTTTTGACTCAT Gene: HCH_01372: hypothetical protein |
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hypothetical protein |
| nnrS |
Gene: HCH_01371: NnrS protein involved in response to NO |
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NnrS protein involved in response to NO |
| hmp |
Gene: HCH_01369: Flavohemoprotein, nitric oxide dioxygenase |
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Marinomonas sp. MWYL1 Site: position = -178 score = 5.08448 sequence = TCGTGTCAATTTGACTCAA Site: position = -134 score = 4.80247 sequence = GTGAGTCTTATTGACTCTA Gene: Mmwyl1_0066: Flavohemoprotein, nitric oxide dioxygenase |
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Teredinibacter turnerae T7901 Site: position = -207 score = 5.02068 sequence = CTGTGTCATAAAGACATCA Gene: TERTU_0471: Flavohemoprotein, nitric oxide dioxygenase |
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Chromohalobacter salexigens DSM 3043 Site: position = -207 score = 4.62156 sequence = CGATGTCATTCTGACATCT Gene: Csal_0452: Flavohemoprotein, nitric oxide dioxygenase |
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Gene: ABO_2119: Flavohemoprotein, nitric oxide dioxygenase |
Flavohemoprotein, nitric oxide dioxygenase |
| CRON 2. | |||||||||||||
| norA |
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Hahella chejuensis KCTC 2396 Site: position = -138 score = 4.29125 sequence = AAGGGTTTTTATAACCCTA Gene: HCH_00714: Nitric oxide-dependent regulator DnrN or NorA |
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Nitric oxide-dependent regulator DnrN or NorA |
| norB |
Gene: HCH_00713: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
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Gene: CJA_1546: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
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Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
| CRON 3. | |||||||||||||
| norR |
*2
Hahella chejuensis KCTC 2396 Site: position = -34 score = 4.86364 sequence = ATGAGTCAAAAAGACATGT Site: position = -15 score = 3.82984 sequence = AAGAGTTTATTTGATATGA Gene: HCH_01373: anaerobic nitric oxide reductase transcription regulator, Fis family Site: position = -36 score = 4.29125 sequence = TAGGGTTATAAAAACCCTT Gene: HCH_00715: anaerobic nitric oxide reductase transcription regulator, Fis family |
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Marinomonas sp. MWYL1 Site: position = -35 score = 4.80247 sequence = TAGAGTCAATAAGACTCAC Site: position = 9 score = 5.08448 sequence = TTGAGTCAAATTGACACGA Gene: Mmwyl1_0067: anaerobic nitric oxide reductase transcription regulator, Fis family |
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Teredinibacter turnerae T7901 Site: position = -65 score = 5.02068 sequence = TGATGTCTTTATGACACAG Gene: TERTU_0470: anaerobic nitric oxide reductase transcription regulator, Fis family |
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Chromohalobacter salexigens DSM 3043 Site: position = -63 score = 4.62156 sequence = AGATGTCAGAATGACATCG Gene: Csal_0451: anaerobic nitric oxide reductase transcription regulator, Fis family |
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anaerobic nitric oxide reductase transcription regulator, Fis family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |