Regulog NorR - Alteromonadales

Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - NorR
- By TF family - Fis
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
Genome | Genes | Operons |
---|---|---|
Pseudoalteromonas atlantica T6c | 4 | 2 |
Alteromonas macleodii 'Deep ecotype' | ||
Glaciecola sp. HTCC2999 | ||
Colwellia psychrerythraea 34H | 4 | 2 |
Alteromonadales bacterium TW-7 | ||
Pseudoalteromonas haloplanktis TAC125 | 4 | 2 |
Pseudoalteromonas tunicata D2 | 4 | 2 |
Idiomarina baltica OS145 | ||
Idiomarina loihiensis L2TR |
Genes | Function | |||||||||
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CRON 1. | ||||||||||
norR |
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Pseudoalteromonas atlantica T6c Site: position = -93 score = 5.71011 sequence = ATGAGTCATAAAGACTCTA Site: position = -74 score = 5.41916 sequence = AAAAGTCTTTATGACTTGA Site: position = -118 score = 5.80628 sequence = AAGAGTCATATTGACTCTA Gene: Patl_3475: anaerobic nitric oxide reductase transcription regulator, Fis family |
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Colwellia psychrerythraea 34H Site: position = -117 score = 4.77636 sequence = CGTAGTCATTATGACCTTG Site: position = -92 score = 5.30179 sequence = TGTGGTCATAATGACTCTA Gene: CPS_0851: anaerobic nitric oxide reductase transcription regulator, Fis family |
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*
Pseudoalteromonas haloplanktis TAC125 Site: position = -15 score = 5.23063 sequence = AAGAGTCATTTTGACATGA Site: position = -58 score = 4.22577 sequence = TTATGTCTTTATGACCTAC Gene: PSHAa2883: anaerobic nitric oxide reductase transcription regulator, Fis family |
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Pseudoalteromonas tunicata D2 Site: position = -102 score = 5.71011 sequence = AAGAGTCTTAATGACTCAT Site: position = -58 score = 5.04803 sequence = ACGTGTCTTTTTGACTCAA Gene: PTD2_10353: anaerobic nitric oxide reductase transcription regulator, Fis family |
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anaerobic nitric oxide reductase transcription regulator, Fis family |
CRON 2. | ||||||||||
Patl_3474 |
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Pseudoalteromonas atlantica T6c Site: position = -150 score = 5.80628 sequence = TAGAGTCAATATGACTCTT Site: position = -175 score = 5.71011 sequence = TAGAGTCTTTATGACTCAT Site: position = -194 score = 5.41916 sequence = TCAAGTCATAAAGACTTTT Gene: Patl_3474: hypothetical protein |
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*
Colwellia psychrerythraea 34H Site: position = -162 score = 5.30179 sequence = TAGAGTCATTATGACCACA Site: position = -137 score = 4.77636 sequence = CAAGGTCATAATGACTACG Gene: CPS_0850: hypothetical protein |
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*
Pseudoalteromonas haloplanktis TAC125 Site: position = -163 score = 5.23063 sequence = TCATGTCAAAATGACTCTT Site: position = -120 score = 4.22577 sequence = GTAGGTCATAAAGACATAA Gene: PSHAa2882: hypothetical protein |
*
Pseudoalteromonas tunicata D2 Site: position = -123 score = 5.71011 sequence = ATGAGTCATTAAGACTCTT Site: position = -167 score = 5.04803 sequence = TTGAGTCAAAAAGACACGT Gene: PTD2_10348: hypothetical protein |
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hypothetical protein |
nnrS |
Gene: Patl_3473: heme and Cu protein, response to NO |
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Gene: CPS_0849: heme and Cu protein, response to NO |
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Gene: PSHAa2881: heme and Cu protein, response to NO |
Gene: PTD2_10343: heme and Cu protein, response to NO |
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heme and Cu protein, response to NO |
hmpA |
Gene: Patl_3472: Flavohemoprotein, nitric oxide dioxygenase |
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Gene: CPS_0848: Flavohemoprotein, nitric oxide dioxygenase |
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Gene: PSHAa2880: Flavohemoprotein, nitric oxide dioxygenase |
Gene: PTD2_10338: Flavohemoprotein, nitric oxide dioxygenase |
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Flavohemoprotein, nitric oxide dioxygenase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |