Regulog NnrR - Sphingomonadales

Properties
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Denitrification
Effector:	Nitric oxide
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - NnrR
By TF family - CRP
By effector - Nitric oxide
By pathway - Denitrification

Statistics of regulated genes
Genome	Genes	Operons
Erythrobacter litoralis HTCC2594
Erythrobacter sp. NAP1
Novosphingobium aromaticivorans DSM 12444
Sphingopyxis alaskensis RB2256
Sphingobium japonicum UT26S
Sphingomonas wittichii RW1	5	2
Zymomonas mobilis subsp. mobilis ZM4

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
nnrR	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	* Sphingomonas wittichii RW1 Site: position = 10 score = 5.40078 sequence = GTTTGCGCTGGCGCAAAC Gene: Swit_5204: Nitric oxide responding transcriptional regulator NnrR (Crp/Fnr family)	Zymomonas mobilis subsp. mobilis ZM4	Nitric oxide responding transcriptional regulator NnrR (Crp/Fnr family)

CRON 2.
hmp1	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	* Sphingomonas wittichii RW1 Site: position = -71 score = 5.40078 sequence = GTTTGCGCCAGCGCAAAC Gene: Swit_5203: Flavohemoprotein, nitric oxide dioxygenase	Zymomonas mobilis subsp. mobilis ZM4	Flavohemoprotein, nitric oxide dioxygenase
tehB	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1 Gene: Swit_5202: possible tellurite resistance protein	Zymomonas mobilis subsp. mobilis ZM4	possible tellurite resistance protein
Swit_5201	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1 Gene: Swit_5201: hypothetical protein	Zymomonas mobilis subsp. mobilis ZM4	hypothetical protein
norB	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1 Gene: Swit_5200: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	Zymomonas mobilis subsp. mobilis ZM4	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NnrR - Sphingomonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --