Regulog NnrR - Sphingomonadales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Denitrification |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By trascription factor - NnrR
- By TF family - CRP
- By effector - Nitric oxide
- By pathway - Denitrification
| Genome | Genes | Operons |
|---|---|---|
| Erythrobacter litoralis HTCC2594 | ||
| Erythrobacter sp. NAP1 | ||
| Novosphingobium aromaticivorans DSM 12444 | ||
| Sphingopyxis alaskensis RB2256 | ||
| Sphingobium japonicum UT26S | ||
| Sphingomonas wittichii RW1 | 5 | 2 |
| Zymomonas mobilis subsp. mobilis ZM4 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| nnrR |
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Sphingomonas wittichii RW1 Site: position = 10 score = 5.40078 sequence = GTTTGCGCTGGCGCAAAC Gene: Swit_5204: Nitric oxide responding transcriptional regulator NnrR (Crp/Fnr family) |
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Nitric oxide responding transcriptional regulator NnrR (Crp/Fnr family) |
| CRON 2. | ||||||||
| hmp1 |
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Sphingomonas wittichii RW1 Site: position = -71 score = 5.40078 sequence = GTTTGCGCCAGCGCAAAC Gene: Swit_5203: Flavohemoprotein, nitric oxide dioxygenase |
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Flavohemoprotein, nitric oxide dioxygenase |
| tehB |
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Gene: Swit_5202: possible tellurite resistance protein |
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possible tellurite resistance protein |
| Swit_5201 |
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Gene: Swit_5201: hypothetical protein |
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hypothetical protein |
| norB |
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Gene: Swit_5200: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
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Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |