Regulog FadR - Pasteurellales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadR
- By taxonomy - Pasteurellales
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 1 | 1 |
| Aggregatibacter aphrophilus NJ8700 | 3 | 2 |
| Pasteurella multocida subsp. multocida str. Pm70 | 2 | 2 |
| Mannheimia succiniciproducens MBEL55E | 2 | 2 |
| Actinobacillus succinogenes 130Z | 2 | 2 |
| Haemophilus somnus 2336 | 4 | 3 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2 | 2 |
| Haemophilus ducreyi 35000HP | 2 | 2 |
| Haemophilus parasuis SH0165 | 1 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| fadL |
Gene: HI0401: Long-chain fatty acid transport protein |
*2
Aggregatibacter aphrophilus NJ8700 Gene: NT05HA_0159: Long-chain fatty acid transport protein Site: position = -64 score = 5.60327 sequence = TACTGGTCCGAACACTT Gene: NT05HA_0160: Long-chain fatty acid transport protein |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -84 score = 6.24047 sequence = GACTGGTCTGAACTCTT Gene: PM1069: Long-chain fatty acid transport protein |
*
Mannheimia succiniciproducens MBEL55E Site: position = -120 score = 6.24047 sequence = TACTGGTCTGAACTCTT Gene: MS0638: Long-chain fatty acid transport protein |
*
Actinobacillus succinogenes 130Z Site: position = -108 score = 5.62728 sequence = AACTGGTCGGATCAGCT Gene: Asuc_1905: Long-chain fatty acid transport protein |
*4
Haemophilus somnus 2336 Site: position = -105 score = 5.98312 sequence = AACTGATCTGACCTCTT Gene: HSM_0477: Long-chain fatty acid transport protein Gene: HSM_0476: Long-chain fatty acid transport protein Site: position = -163 score = 4.5412 sequence = TACTAATCCGACCACTT Gene: HSM_1266: Long-chain fatty acid transport protein Gene: HSM_0341: Long-chain fatty acid transport protein |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -163 score = 5.78307 sequence = TACTGGTCGGAACTCCT Gene: APP7_0991: Long-chain fatty acid transport protein |
*
Haemophilus ducreyi 35000HP Site: position = -156 score = 5.6358 sequence = GACTGGTCTGAACTCTA Gene: HD1078: Long-chain fatty acid transport protein |
*
Haemophilus parasuis SH0165 Site: position = -142 score = 5.30056 sequence = GACTGGTCGGAACTGTG Gene: HAPS_0037: Long-chain fatty acid transport protein |
Long-chain fatty acid transport protein |
| CRON 2. | ||||||||||
| fabA |
*
Haemophilus influenzae Rd KW20 Site: position = -114 score = 4.16135 sequence = GACTGCTCCGACAAGTT Gene: HI1325: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -119 score = 4.96531 sequence = AACTGATCGGACAAGTT Gene: NT05HA_0871: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -116 score = 4.3614 sequence = AACTGCTCCGATAAGTT Gene: PM0484: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -130 score = 6.08469 sequence = AACTGGTCTGAACAGAT Gene: MS1194: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Actinobacillus succinogenes 130Z Site: position = -125 score = 4.4966 sequence = AACTGGTTAGACCAATT Gene: Asuc_1443: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Haemophilus somnus 2336 Site: position = -212 score = 4.16135 sequence = GACTGCTCCGATAAGTT Gene: HSM_1385: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -116 score = 4.16135 sequence = CACTGATCCGACAAGTT Gene: APP7_1976: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Haemophilus ducreyi 35000HP Site: position = -116 score = 4.84315 sequence = AACTGATCGGATTTGCT Gene: HD0181: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
Gene: HAPS_2242: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |