Regulog NrdR - Moraxellaceae
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Moraxellaceae
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Acinetobacter sp. ADP1 | 2 | 1 |
| Acinetobacter baumannii AB0057 | 3 | 1 |
| Psychrobacter arcticum 273-4 | 1 | 1 |
| Psychrobacter sp. PRwf-1 | 3 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| nrdA |
|
|
*
Psychrobacter arcticum 273-4 Site: position = -374 score = 3.90063 sequence = TCCCGCTATATTGTGT Site: position = -342 score = 4.86214 sequence = ACGCTATATGTAGTGC Gene: Psyc_1263: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
*
Psychrobacter sp. PRwf-1 Site: position = -111 score = 5.27706 sequence = ACCCCATATATTGTGT Site: position = -78 score = 4.76796 sequence = ACACTATATATTGGGG Gene: PsycPRwf_1577: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
| nrdB |
|
|
Gene: Psyc_1268: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: PsycPRwf_1578: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
| yfaE |
|
|
Gene: Psyc_1269: Ferredoxin |
Gene: PsycPRwf_1579: Ferredoxin |
Ferredoxin |
| CRON 2. | |||||
| nrdA |
*
Acinetobacter sp. ADP1 Site: position = -100 score = 4.9474 sequence = CCACTAAGTCTTGTGT Site: position = -132 score = 4.83645 sequence = TTCCCGTATCTTGTGC Gene: ACIAD0724: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
*
Acinetobacter baumannii AB0057 Site: position = -133 score = 5.19349 sequence = ATCCCGTATCTTGTGT Site: position = -101 score = 4.9474 sequence = CTACTAAGTCTTGTGT Gene: AB57_0794: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
|
|
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
| AB57_0793 |
|
Gene: AB57_0793: hypothetical protein |
|
|
hypothetical protein |
| nrdB |
Gene: ACIAD0722: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: AB57_0792: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
|
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |