Regulog NsrR - Sphingomonadales
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By trascription factor - NsrR
- By TF family - Rrf2
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Genome | Genes | Operons |
|---|---|---|
| Erythrobacter litoralis HTCC2594 | ||
| Erythrobacter sp. NAP1 | ||
| Novosphingobium aromaticivorans DSM 12444 | 2 | 2 |
| Sphingopyxis alaskensis RB2256 | 2 | 2 |
| Sphingobium japonicum UT26S | ||
| Sphingomonas wittichii RW1 | ||
| Zymomonas mobilis subsp. mobilis ZM4 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| PF01152 |
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Gene: Saro_1574: Truncated hemoglobin |
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Sphingopyxis alaskensis RB2256 Site: position = -77 score = 4.14976 sequence = TAAGTATATTATATATTGC Site: position = -34 score = 5.8004 sequence = GAGGTATCTTATATACCAT Gene: Sala_0535: Truncated hemoglobin |
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2
Sphingomonas wittichii RW1 Gene: Swit_5297: Truncated hemoglobin Gene: Swit_3175: Truncated hemoglobin |
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Truncated hemoglobin |
| CRON 2. | ||||||||
| nsrR |
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Novosphingobium aromaticivorans DSM 12444 Site: position = 3 score = 5.65423 sequence = CTGGTATTTAATCTACTTG Gene: Saro_0149: Nitrite-sensitive transcriptional repressor NsrR |
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Sphingopyxis alaskensis RB2256 Site: position = -66 score = 5.8004 sequence = ATGGTATATAAGATACCTC Gene: Sala_0536: Nitrite-sensitive transcriptional repressor NsrR |
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Nitrite-sensitive transcriptional repressor NsrR |
| CRON 3. | ||||||||
| hmp |
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Novosphingobium aromaticivorans DSM 12444 Site: position = -48 score = 5.65423 sequence = CAAGTAGATTAAATACCAG Gene: Saro_0148: Flavohemoprotein, nitric oxide dioxygenase |
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Gene: Swit_5299: Flavohemoprotein, nitric oxide dioxygenase |
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Flavohemoprotein, nitric oxide dioxygenase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |