Statistics of regulated genes

Genome	Genes	Operons
Burkholderia pseudomallei K96243	5	5
Burkholderia mallei ATCC 23344	4	4
Burkholderia sp. 383	3	2
Burkholderia cepacia AMMD	3	2
Burkholderia vietnamiensis G4	7	3
Burkholderia glumae BGR1	3	2
Burkholderia xenovorans LB400	2	2
Burkholderia phymatum STM815	4	3

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes									Function
CRON 1.
norB	* Burkholderia pseudomallei K96243 Site: position = -93 score = 4.56835 sequence = CATACATTCTTTGTACATG Gene: BPSL2351: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	* Burkholderia mallei ATCC 23344 Site: position = -93 score = 4.56835 sequence = CATACATTCTTTGTACATG Gene: BMA0633: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	Burkholderia sp. 383	Burkholderia cepacia AMMD	Burkholderia vietnamiensis G4	Burkholderia glumae BGR1	Burkholderia xenovorans LB400	Burkholderia phymatum STM815	Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
CRON 2.
nsrR2	Burkholderia pseudomallei K96243	Burkholderia mallei ATCC 23344	Burkholderia sp. 383	Burkholderia cepacia AMMD	* Burkholderia vietnamiensis G4 Site: position = -87 score = 4.22009 sequence = GAAGTATTTTTAATGCATG Gene: Bcep1808_6181: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia glumae BGR1	Burkholderia xenovorans LB400	Burkholderia phymatum STM815	Nitrite-sensitive transcriptional repressor NsrR
nnrS	*2 Burkholderia pseudomallei K96243 Site: position = -36 score = 5.01668 sequence = GATACATAATAAATGCATC Gene: BPSL2368: NnrS protein involved in response to NO Site: position = -39 score = 4.64399 sequence = CATGCATCAAGAAAGCAAC Gene: BPSL2355: NnrS protein involved in response to NO	*2 Burkholderia mallei ATCC 23344 Site: position = -12 score = 5.01668 sequence = GATACATAATAAATGCATC Gene: BMA0614: NnrS protein involved in response to NO Site: position = -39 score = 4.64399 sequence = CATGCATCAAGAAAGCAAC Gene: BMA0630: NnrS protein involved in response to NO	Burkholderia sp. 383	Burkholderia cepacia AMMD	Burkholderia vietnamiensis G4 Gene: Bcep1808_6182: NnrS protein involved in response to NO	Burkholderia glumae BGR1	Burkholderia xenovorans LB400	Burkholderia phymatum STM815	NnrS protein involved in response to NO
PF01814	Burkholderia pseudomallei K96243	Burkholderia mallei ATCC 23344	Burkholderia sp. 383	Burkholderia cepacia AMMD	Burkholderia vietnamiensis G4 Gene: Bcep1808_6183: hemerythrin HHE cation binding domain-containing protein	Burkholderia glumae BGR1	Burkholderia xenovorans LB400	Burkholderia phymatum STM815	hemerythrin HHE cation binding domain-containing protein
PF10006	* Burkholderia pseudomallei K96243 Site: position = -144 score = 4.5495 sequence = GTTGCTCACAATATGCATC Gene: BPSS1139: hypothetical protein	Burkholderia mallei ATCC 23344	Burkholderia sp. 383	Burkholderia cepacia AMMD	Burkholderia vietnamiensis G4 Gene: Bcep1808_6184: hypothetical protein	Burkholderia glumae BGR1	Burkholderia xenovorans LB400	Burkholderia phymatum STM815	hypothetical protein
CRON 3.
hcp	Burkholderia pseudomallei K96243	Burkholderia mallei ATCC 23344	* Burkholderia sp. 383 Site: position = -111 score = 4.82242 sequence = GATGCATACGCAACGCATC Gene: Bcep18194_B1121: Hydroxylamine reductase (EC 1.7.-.-)	* Burkholderia cepacia AMMD Site: position = -111 score = 4.8585 sequence = GATGCATCAGAGAAGCATC Gene: Bamb_4090: Hydroxylamine reductase (EC 1.7.-.-)	* Burkholderia vietnamiensis G4 Site: position = -109 score = 5.17024 sequence = GATGCATAAAGAACGCATC Gene: Bcep1808_5223: Hydroxylamine reductase (EC 1.7.-.-)	* Burkholderia glumae BGR1 Site: position = -110 score = 4.92499 sequence = GATGCATGAATGACGCATC Gene: bglu_2g04830: Hydroxylamine reductase (EC 1.7.-.-)	Burkholderia xenovorans LB400	* Burkholderia phymatum STM815 Site: position = -67 score = 3.80219 sequence = CATGCGCAGACGATCCATA Gene: Bphy_6194: Hydroxylamine reductase (EC 1.7.-.-)	Hydroxylamine reductase (EC 1.7.-.-)
hcr	Burkholderia pseudomallei K96243	Burkholderia mallei ATCC 23344	Burkholderia sp. 383 Gene: Bcep18194_B1122: NADH oxidoreductase hcr (EC 1.-.-.-)	Burkholderia cepacia AMMD Gene: Bamb_4089: NADH oxidoreductase hcr (EC 1.-.-.-)	Burkholderia vietnamiensis G4 Gene: Bcep1808_5222: NADH oxidoreductase hcr (EC 1.-.-.-)	Burkholderia glumae BGR1 Gene: bglu_2g04840: NADH oxidoreductase hcr (EC 1.-.-.-)	Burkholderia xenovorans LB400	Burkholderia phymatum STM815 Gene: Bphy_6193: NADH oxidoreductase hcr (EC 1.-.-.-)	NADH oxidoreductase hcr (EC 1.-.-.-)
CRON 4.
nsrR	Burkholderia pseudomallei K96243 Gene: BPSL1483: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia mallei ATCC 23344 Gene: BMA1378: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia sp. 383 Gene: Bcep18194_A5149: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia cepacia AMMD Gene: Bamb_1786: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia vietnamiensis G4 Gene: Bcep1808_1775: Nitrite-sensitive transcriptional repressor NsrR	Burkholderia glumae BGR1 Gene: bglu_1g14220: Nitrite-sensitive transcriptional repressor NsrR	* Burkholderia xenovorans LB400 Site: position = -107 score = 3.81954 sequence = CATGCGTAGCGCCTGCATC Gene: Bxe_A2375: Nitrite-sensitive transcriptional repressor NsrR	* Burkholderia phymatum STM815 Site: position = -70 score = 4.31239 sequence = GATGTGTTTTAAAAGCATG Gene: Bphy_0937: Nitrite-sensitive transcriptional repressor NsrR	Nitrite-sensitive transcriptional repressor NsrR
CRON 5.
PF01152	Burkholderia pseudomallei K96243 Gene: BPSL1482: Truncated hemoglobins	Burkholderia mallei ATCC 23344	Burkholderia sp. 383 Gene: Bcep18194_A5150: Truncated hemoglobins	Burkholderia cepacia AMMD Gene: Bamb_1787: Truncated hemoglobins	Burkholderia vietnamiensis G4 Gene: Bcep1808_1776: Truncated hemoglobins	Burkholderia glumae BGR1 Gene: bglu_1g14210: Truncated hemoglobins	* Burkholderia xenovorans LB400 Site: position = -218 score = 3.81954 sequence = GATGCAGGCGCTACGCATG Gene: Bxe_A2376: Truncated hemoglobins	* Burkholderia phymatum STM815 Site: position = -156 score = 4.31239 sequence = CATGCTTTTAAAACACATC Gene: Bphy_0936: Truncated hemoglobins	Truncated hemoglobins
CRON 6.
hmp	* Burkholderia pseudomallei K96243 Site: position = -39 score = 4.4267 sequence = GATGTATCGTTTGCGAATG Gene: BPSL2840: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	* Burkholderia mallei ATCC 23344 Site: position = -39 score = 4.4267 sequence = GATGTATCGTTTGCGAATG Gene: BMA2417: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	* Burkholderia sp. 383 Site: position = -36 score = 4.8642 sequence = GATGTATCGTATGTGCATG Gene: Bcep18194_A3823: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	* Burkholderia cepacia AMMD Site: position = -36 score = 4.8642 sequence = GATGTATCGTATGTGCATG Gene: Bamb_0627: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	* Burkholderia vietnamiensis G4 Site: position = -35 score = 4.69109 sequence = CATGTATCGTTTGAGCATG Gene: Bcep1808_0698: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	* Burkholderia glumae BGR1 Site: position = -48 score = 4.37861 sequence = AATGTATCGTGTATGAATC Gene: bglu_1g06210: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	Burkholderia xenovorans LB400 Gene: Bxe_B2333: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	Burkholderia phymatum STM815 Gene: Bphy_4026: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)

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