Regulog FabR - Xanthomonadales
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-CoA; Unsaturated acyl-ACP |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By trascription factor - FabR
- By TF family - TetR
- By effector - Unsaturated acyl-CoA
- By effector - Unsaturated acyl-ACP
- By pathway - Fatty acid biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Xylella fastidiosa 9a5c | ||
| Xanthomonas axonopodis pv. citri str. 306 | 3 | 2 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 3 | 2 |
| Stenotrophomonas maltophilia K279a | 3 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| desC |
|
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -49 score = 6.16239 sequence = AATATACAAGTGTATACA Gene: XAC3960: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -31 score = 5.92449 sequence = GATATACAACTGTATACA Gene: XCC3879: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
*
Stenotrophomonas maltophilia K279a Site: position = -9 score = 6.28133 sequence = AATATACACATGTATACA Gene: Smlt2832: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
| desB |
|
Gene: XAC3959: Acyl-CoA delta-9-desaturase, DesB |
Gene: XCC3878: Acyl-CoA delta-9-desaturase, DesB |
Gene: Smlt2831: Acyl-CoA delta-9-desaturase, DesB |
Acyl-CoA delta-9-desaturase, DesB |
| CRON 2. | |||||
| fabR2 |
|
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -61 score = 6.16239 sequence = TGTATACACTTGTATATT Gene: XAC3961: Unsaturated fatty acid biosythesis repressor FabR, TetR family |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -62 score = 5.92449 sequence = TGTATACAGTTGTATATC Gene: XCC3880: Unsaturated fatty acid biosythesis repressor FabR, TetR family |
*
Stenotrophomonas maltophilia K279a Site: position = -62 score = 6.28133 sequence = TGTATACATGTGTATATT Gene: Smlt2833: Unsaturated fatty acid biosythesis repressor FabR, TetR family |
Unsaturated fatty acid biosythesis repressor FabR, TetR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |