Regulog Ddes_1411/Ddes_2092 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - CRP

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	8	6
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
Ddes_1413	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -227 score = 5.69 sequence = TTGTTGTTGGTGCAACAT Site: position = -101 score = 5.96 sequence = ATGTTGCATGGGCAACAA Gene: Ddes_1413: hypothetical protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	2 Lawsonia intracellularis PHE/MN1-00 Gene: LI0172: hypothetical protein Gene: LI0461: hypothetical protein	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	hypothetical protein

CRON 2.
Ddes_2093	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	2 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774* Site: position = -128 score = 5.72724 sequence = TTGTTGCAATGACAACAT Gene: Ddes_1412: hypothetical protein Site: position = -129 score = 5.65182 sequence = ATGTTGCATACGGAACAC Gene: Ddes_2093: hypothetical protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	hypothetical protein
Dde_1204	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_1204: sodium/dicarboxylate or sulfate cotransporter	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2094: sodium/dicarboxylate or sulfate cotransporter	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02114: sodium/dicarboxylate or sulfate cotransporter	Desulfovibrio salexigens DSM 2638 Gene: Desal_0407: sodium/dicarboxylate or sulfate cotransporter	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	sodium/dicarboxylate or sulfate cotransporter
Ddes_2095	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2095: hypothetical protein	3 Desulfovibrio piger ATCC 29098 Gene: DESPIG_02593: hypothetical protein Gene: DESPIG_00992: hypothetical protein Gene: DESPIG_00665: hypothetical protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	hypothetical protein

CRON 3.
Ddes_1414	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -125 score = 5.69766 sequence = ATGTTGCACCAACAACAA Gene: Ddes_1414: major facilitator superfamily MFS_1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	major facilitator superfamily MFS_1

CRON 4.
Ddes_1411/Ddes_2092	Desulfovibrio vulgaris Hildenborough Gene: DVU0379: transcriptional regulator, Crp/Fnr family	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_0463: transcriptional regulator, Crp/Fnr family	2 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774* Site: position = -97 score = 5.37949 sequence = GTGTTCCGTATGCAACAT Gene: Ddes_2092: transcriptional regulator, Crp/Fnr family Site: position = -39 score = 4.68737 sequence = ATGTTGCAACAGCATGAA Site: position = -189 score = 5.6377 sequence = ATGTTGTCATTGCAACAA Gene: Ddes_1411: transcriptional regulator, Crp/Fnr family	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_1361: transcriptional regulator, Crp/Fnr family	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	transcriptional regulator, Crp/Fnr family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Ddes_1411/Ddes_2092 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --