Regulog Ddes_1411/Ddes_2092 - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - CRP
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | ||
| Desulfovibrio vulgaris str. Miyazaki F | ||
| Desulfovibrio desulfuricans G20 | ||
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 8 | 6 |
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | ||
| Desulfovibrio magneticus RS-1 | ||
| Lawsonia intracellularis PHE/MN1-00 | ||
| Desulfomicrobium baculatum DSM 4028 | ||
| Desulfohalobium retbaense DSM 5692 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| Ddes_1413 |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -227 score = 5.69 sequence = TTGTTGTTGGTGCAACAT Site: position = -101 score = 5.96 sequence = ATGTTGCATGGGCAACAA Gene: Ddes_1413: hypothetical protein |
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2
Lawsonia intracellularis PHE/MN1-00 Gene: LI0172: hypothetical protein Gene: LI0461: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||||||
| Ddes_2093 |
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*2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -128 score = 5.72724 sequence = TTGTTGCAATGACAACAT Gene: Ddes_1412: hypothetical protein Site: position = -129 score = 5.65182 sequence = ATGTTGCATACGGAACAC Gene: Ddes_2093: hypothetical protein |
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hypothetical protein |
| Dde_1204 |
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Gene: Dde_1204: sodium/dicarboxylate or sulfate cotransporter |
Gene: Ddes_2094: sodium/dicarboxylate or sulfate cotransporter |
Gene: DESPIG_02114: sodium/dicarboxylate or sulfate cotransporter |
Gene: Desal_0407: sodium/dicarboxylate or sulfate cotransporter |
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sodium/dicarboxylate or sulfate cotransporter |
| Ddes_2095 |
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Gene: Ddes_2095: hypothetical protein |
3
Desulfovibrio piger ATCC 29098 Gene: DESPIG_02593: hypothetical protein Gene: DESPIG_00992: hypothetical protein Gene: DESPIG_00665: hypothetical protein |
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hypothetical protein |
| CRON 3. | |||||||||||
| Ddes_1414 |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -125 score = 5.69766 sequence = ATGTTGCACCAACAACAA Gene: Ddes_1414: major facilitator superfamily MFS_1 |
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major facilitator superfamily MFS_1 |
| CRON 4. | |||||||||||
| Ddes_1411/Ddes_2092 |
Gene: DVU0379: transcriptional regulator, Crp/Fnr family |
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Gene: Dde_0463: transcriptional regulator, Crp/Fnr family |
*2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -97 score = 5.37949 sequence = GTGTTCCGTATGCAACAT Gene: Ddes_2092: transcriptional regulator, Crp/Fnr family Site: position = -39 score = 4.68737 sequence = ATGTTGCAACAGCATGAA Site: position = -189 score = 5.6377 sequence = ATGTTGTCATTGCAACAA Gene: Ddes_1411: transcriptional regulator, Crp/Fnr family |
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Gene: Desal_1361: transcriptional regulator, Crp/Fnr family |
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transcriptional regulator, Crp/Fnr family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |