Regulog Desal_2066 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - CRP

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638	2	2
Desulfovibrio magneticus RS-1	3	2
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DMR_38640	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -40 score = 6.18918 sequence = CATTGATCTCGATCAACA Gene: Desal_2066: transcriptional regulator, Crp/Fnr family	* Desulfovibrio magneticus RS-1 Site: position = -87 score = 6.34392 sequence = CATTGATGTGGATCAACG Gene: DMR_38640: transcriptional regulator, Crp/Fnr family	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	* Desulfohalobium retbaense DSM 5692 Site: position = -85 score = 6.10594 sequence = CATTGATGCAGATCAAGG Gene: Dret_1643: transcriptional regulator, Crp/Fnr family	transcriptional regulator, Crp/Fnr family

CRON 2.
Desal_2272	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -97 score = 6.41613 sequence = CGTTGATCTGGATCAATG Gene: Desal_2272: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Desulfovibrio magneticus RS-1 Gene: DMR_26230: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	* Desulfohalobium retbaense DSM 5692 Site: position = -305 score = 6.30364 sequence = CATTGATCTCAATCAATG Gene: Dret_2254: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	FAD-dependent pyridine nucleotide-disulphide oxidoreductase

CRON 3.
DMR_38630	Desulfovibrio vulgaris Hildenborough Gene: DVU3143: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1693: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Desulfovibrio desulfuricans G20 Gene: Dde_0657: 4Fe-4S ferredoxin iron-sulfur binding domain protein	2 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0544: 4Fe-4S ferredoxin iron-sulfur binding domain protein Gene: Ddes_2065: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02228: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_0829: 4Fe-4S ferredoxin iron-sulfur binding domain protein	* Desulfovibrio magneticus RS-1 Site: position = -82 score = 6.05265 sequence = CGTTGATCCACATCAATG Gene: DMR_38630: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1361: 4Fe-4S ferredoxin iron-sulfur binding domain protein	Desulfohalobium retbaense DSM 5692 Gene: Dret_0164: 4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S ferredoxin iron-sulfur binding domain protein
DMR_38620	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_0656: iron-sulfur cluster-binding protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2066: iron-sulfur cluster-binding protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02229: iron-sulfur cluster-binding protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_0830: iron-sulfur cluster-binding protein	Desulfovibrio magneticus RS-1 Gene: DMR_38620: iron-sulfur cluster-binding protein	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1360: iron-sulfur cluster-binding protein	Desulfohalobium retbaense DSM 5692 Gene: Dret_0165: iron-sulfur cluster-binding protein	iron-sulfur cluster-binding protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Desal_2066 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --