Regulog Desal_2066 - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - CRP
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | ||
| Desulfovibrio vulgaris str. Miyazaki F | ||
| Desulfovibrio desulfuricans G20 | ||
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | ||
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | 2 | 2 |
| Desulfovibrio magneticus RS-1 | 3 | 2 |
| Lawsonia intracellularis PHE/MN1-00 | ||
| Desulfomicrobium baculatum DSM 4028 | ||
| Desulfohalobium retbaense DSM 5692 | 2 | 2 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| DMR_38640 |
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Desulfovibrio salexigens DSM 2638 Site: position = -40 score = 6.18918 sequence = CATTGATCTCGATCAACA Gene: Desal_2066: transcriptional regulator, Crp/Fnr family |
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Desulfovibrio magneticus RS-1 Site: position = -87 score = 6.34392 sequence = CATTGATGTGGATCAACG Gene: DMR_38640: transcriptional regulator, Crp/Fnr family |
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Desulfohalobium retbaense DSM 5692 Site: position = -85 score = 6.10594 sequence = CATTGATGCAGATCAAGG Gene: Dret_1643: transcriptional regulator, Crp/Fnr family |
transcriptional regulator, Crp/Fnr family |
| CRON 2. | |||||||||||
| Desal_2272 |
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Desulfovibrio salexigens DSM 2638 Site: position = -97 score = 6.41613 sequence = CGTTGATCTGGATCAATG Gene: Desal_2272: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Gene: DMR_26230: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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Desulfohalobium retbaense DSM 5692 Site: position = -305 score = 6.30364 sequence = CATTGATCTCAATCAATG Gene: Dret_2254: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
| CRON 3. | |||||||||||
| DMR_38630 |
Gene: DVU3143: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DvMF_1693: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Dde_0657: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0544: 4Fe-4S ferredoxin iron-sulfur binding domain protein Gene: Ddes_2065: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DESPIG_02228: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Desal_0829: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
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Desulfovibrio magneticus RS-1 Site: position = -82 score = 6.05265 sequence = CGTTGATCCACATCAATG Gene: DMR_38630: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
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Gene: Dbac_1361: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Dret_0164: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
4Fe-4S ferredoxin iron-sulfur binding domain protein |
| DMR_38620 |
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Gene: Dde_0656: iron-sulfur cluster-binding protein |
Gene: Ddes_2066: iron-sulfur cluster-binding protein |
Gene: DESPIG_02229: iron-sulfur cluster-binding protein |
Gene: Desal_0830: iron-sulfur cluster-binding protein |
Gene: DMR_38620: iron-sulfur cluster-binding protein |
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Gene: Dbac_1360: iron-sulfur cluster-binding protein |
Gene: Dret_0165: iron-sulfur cluster-binding protein |
iron-sulfur cluster-binding protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |