Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YvfU - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor
Biological process: Metabolite transport
Effector: YvfT, sensor histidine kinase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 4 1
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13 6 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579 4 1
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yvfR
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -93
score = 7.44437
sequence = ATGACAT-(0)-TTGTCAC

Gene: BSU34090: Putative ABC efflux transporter ATP-binding protein
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
*
Bacillus licheniformis DSM 13

Site:
position = -98
score = 7.91204
sequence = ATGACAT-(0)-TTGTCAT

Gene: BLi04298: Putative ABC efflux transporter ATP-binding protein
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -96
score = 7.44437
sequence = ATGACAA-(0)-TTGTCAT

Gene: BC5355: Putative ABC efflux transporter ATP-binding protein
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -140
score = 7.91204
sequence = ATGACAT-(0)-TTGTCAT

Gene: Pjdr2_0716: Putative ABC efflux transporter ATP-binding protein
Putative ABC efflux transporter ATP-binding protein
yvfS
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU34080: Putative ABC transporter permease
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 2
Bacillus licheniformis DSM 13

Gene: BLi04299: Putative ABC transporter permease

Gene: BLi04300: Putative ABC transporter permease
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC5354: Putative ABC transporter permease
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_0717: Putative ABC transporter permease
Putative ABC transporter permease
BLi04302
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04302: Similar to signal transduction histidine kinase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Similar to signal transduction histidine kinase
yvfT
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU34070: Two-component sensor histidine kinase
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04303: Two-component sensor histidine kinase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC5353: Two-component sensor histidine kinase
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_0718: Two-component sensor histidine kinase
Two-component sensor histidine kinase
yvfU
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU34060: Two-component response regulator
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04304: Two-component response regulator
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC5352: Two-component response regulator
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_0719: Two-component response regulator
Two-component response regulator
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD