Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog GltC2 - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Glutamate metabolism
Effector: Glutamate; 2-oxoglutarate; RocG, glutamate dehydrogenase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 2 2
Bacillus clausii KSM-K16 2 2
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gdhA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032

Gene: BPUM_3511: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
 
Bacillus licheniformis DSM 13

Gene: BLi02964: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -134
score = 5.69628
sequence = ATTTAATTATAAAAT

Gene: BH2101: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
*
Bacillus clausii KSM-K16

Site:
position = -128
score = 5.28956
sequence = ACTTAATTATAAAAT

Gene: ABC3392: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -82
score = 4.61554
sequence = ATTTGATATTAATAT

Gene: Pjdr2_1708: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
 
CRON 2.
gltC2
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -84
score = 5.69628
sequence = ATTTTATAATTAAAT

Gene: BH2102: Transcriptional activator of glutamate synthase, LysR family
*
Bacillus clausii KSM-K16

Site:
position = -86
score = 5.28956
sequence = ATTTTATAATTAAGT

Gene: ABC3391: Transcriptional activator of glutamate synthase, LysR family
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -100
score = 4.61554
sequence = ATATTAATATCAAAT

Gene: Pjdr2_1709: Transcriptional activator of glutamate synthase, LysR family
Transcriptional activator of glutamate synthase, LysR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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