Regulog NrdR - Cyanobacteria
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Cyanobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Synechococcus sp. PCC 7002 | ||
| Synechocystis sp. PCC 6803 | ||
| Cyanothece sp. ATCC 51142 | ||
| Cyanothece sp. PCC 8801 | ||
| Cyanothece sp. PCC 7425 | ||
| Microcystis aeruginosa NIES-843 | ||
| Nostoc sp. PCC 7120 | ||
| Trichodesmium erythraeum IMS101 | ||
| Synechococcus elongatus PCC 7942 | 1 | 1 |
| Prochlorococcus marinus str. MIT 9313 | 1 | 1 |
| Synechococcus sp. JA-3-3Ab | ||
| Synechococcus sp. WH 8102 | 1 | 1 |
| Gloeobacter violaceus PCC 7421 | 1 | 1 |
| Thermosynechococcus elongatus BP-1 | 1 | 1 |
| Genes | Function | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||
| nrdJ |
|
|
|
|
|
|
Gene: all4035: ribonucleotide reductase (Class II) |
|
*
Synechococcus elongatus PCC 7942 Site: position = -44 score = 4.03291 sequence = ACTCCATCCCTAGTGT Gene: Synpcc7942_1609: ribonucleotide reductase (Class II) |
*
Prochlorococcus marinus str. MIT 9313 Site: position = -9 score = 4.99699 sequence = GCACTGTCGATGGTGT Site: position = 20 score = 3.91037 sequence = ACACcATgagTgGcGg Gene: PMT0793: ribonucleotide reductase (Class II) |
Gene: CYA_2169: ribonucleotide reductase (Class II) |
*
Synechococcus sp. WH 8102 Site: position = -81 score = 4.88709 sequence = ACACTGCCAATGGTGG Site: position = -47 score = 3.39489 sequence = cCcCcATCtgTgGcGT Gene: SYNW1147: ribonucleotide reductase (Class II) |
*
Gloeobacter violaceus PCC 7421 Site: position = -70 score = 3.60465 sequence = GATCTACCCATGGTGT Site: position = -40 score = 3.97589 sequence = CCACAGTCGGCAGTTG Gene: gll3966: ribonucleotide reductase (Class II) |
*
Thermosynechococcus elongatus BP-1 Site: position = -38 score = 3.76369 sequence = ACACTACACCTAGTAT Gene: tll1327: ribonucleotide reductase (Class II) |
ribonucleotide reductase (Class II) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |