Regulog NorR - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - NorR
- By TF family - Fis
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | 2 | 2 |
| Ralstonia pickettii 12J | 2 | 2 |
| Ralstonia metallidurans CH34 | 2 | 2 |
| Ralstonia eutropha JMP134 | 3 | 2 |
| Ralstonia eutropha H16 | 6 | 4 |
| Cupriavidus taiwanensis | 3 | 2 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| norR |
*
Ralstonia solanacearum GMI1000 Site: position = -36 score = 3.95552 sequence = CAAGGTTCTTTTCACCCTC Site: position = -62 score = 4.66454 sequence = CTGGGTAAAATCGACCGCA Gene: RS02290: anaerobic nitric oxide reductase transcription regulator, Fis family |
*
Ralstonia pickettii 12J Site: position = -36 score = 4.46594 sequence = CAAGGTATCTTTCACCCTT Site: position = -62 score = 4.5624 sequence = CGGGGTAGAATTCACCGTC Gene: Rpic_4656: anaerobic nitric oxide reductase transcription regulator, Fis family |
*
Ralstonia metallidurans CH34 Site: position = -35 score = 3.94881 sequence = TAGGGTGTTTTTGACTATC Site: position = -60 score = 5.07726 sequence = CGCGGTAATATTCACCGTG Gene: Rmet_3166: anaerobic nitric oxide reductase transcription regulator, Fis family |
*
Ralstonia eutropha JMP134 Site: position = -29 score = 4.7712 sequence = CGCGGTGTAATTTACCCGT Site: position = -55 score = 4.59772 sequence = AACGGTATAATTCACCCAC Gene: Reut_B5057: anaerobic nitric oxide reductase transcription regulator, Fis family |
*2
Ralstonia eutropha H16 Site: position = -34 score = 4.25444 sequence = CGCGGTACTTATCACCCTT Site: position = -60 score = 5.01946 sequence = GACGGTAATTAATACCCTA Gene: H16_B2325: anaerobic nitric oxide reductase transcription regulator, Fis family Site: position = -35 score = 5.12319 sequence = CATGGTATATTTGACCCGG Site: position = -61 score = 5.29638 sequence = TACGGTCATATTTACCTTA Gene: PHG246: anaerobic nitric oxide reductase transcription regulator, Fis family |
*
Cupriavidus taiwanensis Site: position = -35 score = 4.44534 sequence = CGCGGTACTAATTACCCTT Site: position = -61 score = 4.91087 sequence = AAGGGTATTAACTACCCTA Gene: RALTA_B2089: anaerobic nitric oxide reductase transcription regulator, Fis family |
anaerobic nitric oxide reductase transcription regulator, Fis family |
| CRON 2. | |||||||
| norA |
*
Ralstonia solanacearum GMI1000 Site: position = -122 score = 4.66454 sequence = TGCGGTCGATTTTACCCAG Site: position = -148 score = 3.95552 sequence = GAGGGTGAAAAGAACCTTG Site: position = -168 score = 4.1517 sequence = CATGGTTGGAATTACCTGA Gene: RS02289: Nitric oxide-dependent regulator DnrN or NorA |
*
Ralstonia pickettii 12J Site: position = -121 score = 4.5624 sequence = GACGGTGAATTCTACCCCG Site: position = -147 score = 4.46594 sequence = AAGGGTGAAAGATACCTTG Site: position = -167 score = 4.64135 sequence = CATGGTTGAAATGACCCTG Gene: Rpic_4655: Nitric oxide-dependent regulator DnrN or NorA |
|
*
Ralstonia eutropha JMP134 Site: position = -106 score = 4.59772 sequence = GTGGGTGAATTATACCGTT Site: position = -132 score = 4.7712 sequence = ACGGGTAAATTACACCGCG Site: position = -151 score = 5.09608 sequence = TAGGGTCATAAATACCTTA Gene: Reut_B5056: Nitric oxide-dependent regulator DnrN or NorA |
*2
Ralstonia eutropha H16 Site: position = -108 score = 5.29638 sequence = TAAGGTAAATATGACCGTA Site: position = -153 score = 4.7723 sequence = CATGGTGATAAATACCGGT Site: position = -134 score = 5.12319 sequence = CCGGGTCAAATATACCATG Gene: PHG245: Nitric oxide-dependent regulator DnrN or NorA Site: position = -154 score = 4.94671 sequence = CATGGTTAAAAATACCGTA Site: position = -136 score = 4.25444 sequence = AAGGGTGATAAGTACCGCG Site: position = -110 score = 5.01946 sequence = TAGGGTATTAATTACCGTC Gene: H16_B2324: Nitric oxide-dependent regulator DnrN or NorA |
*
Cupriavidus taiwanensis Site: position = -136 score = 4.44534 sequence = AAGGGTAATTAGTACCGCG Site: position = -155 score = 4.39671 sequence = CATGGTGAAAAAAACCTCA Site: position = -110 score = 4.91087 sequence = TAGGGTAGTTAATACCCTT Gene: RALTA_B2088: Nitric oxide-dependent regulator DnrN or NorA |
Nitric oxide-dependent regulator DnrN or NorA |
| norB |
Gene: RSp1505: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Gene: Rpic_4013: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
*
Ralstonia metallidurans CH34 Site: position = -119 score = 5.07726 sequence = CACGGTGAATATTACCGCG Site: position = -144 score = 3.94881 sequence = GATAGTCAAAAACACCCTA Site: position = -163 score = 4.64135 sequence = CATGGTCAAAACAACCCTA Gene: Rmet_3167: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Gene: Reut_B5055: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
2
Ralstonia eutropha H16 Gene: H16_B2323: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent Gene: PHG244: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Gene: RALTA_B2087: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |