Propagation of LiuR regulog to Marinobacter algicola DG893
| Source regulog: | LiuR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Marinobacter algicola DG893 |
| Orthologous TF(s) | MDG893_15952 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -51
Score: 6.3 Sequence: CTTTACGTTTACGTAAAC
Locus tag: MDG893_15952
|
||||
| MDG893_15952 | -51 | 6.3 | CTTTACGTTTACGTAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: liuR | ||||
| Ortholog function: branched chain amino acid metabolism regulator, MerR family | ||||
| Shewanella oneidensis MR-1 | SO_1898 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella putrefaciens CN-32 | Sputcn32_1720 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella sp W3-18-1 | Sputw3181_2305 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella sp ANA-3 | Shewana3_1673 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella sp MR-4 | Shewmr4_2321 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella sp MR-7 | Shewmr7_2393 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella baltica OS155 | Sbal_2827 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella denitrificans OS217 | Sden_2244 | -58 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella frigidimarina NCIMB 400 | Sfri_2726 | -59 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella amazonensis SB2B | Sama_1363 | -65 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella loihica PV-4 | Shew_2569 | -63 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella pealeana ATCC 700345 | Spea_2796 | -63 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella halifaxensis HAW-EB4 | Shal_2901 | -62 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella piezotolerans WP3 | swp_3441 | -28 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella sediminis HAW-EB3 | Ssed_1459 | -60 | 6 | CTTTACCTTTACGTAAAC |
| Shewanella woodyi ATCC 51908 | Swoo_3222 | -61 | 6 | CTTTACCTTTACGTAAAC |
|
Position: -138
Score: 6.2 Sequence: GTTTACGTTAAGGTAAAC
Locus tag: MDG893_14965
|
||||
| MDG893_14965 | -138 | 6.2 | GTTTACGTTAAGGTAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bkdA1 | ||||
| Ortholog function: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit | ||||
| Shewanella oneidensis MR-1 | SO_2339 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella putrefaciens CN-32 | Sputcn32_1885 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella sp W3-18-1 | Sputw3181_2123 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella sp ANA-3 | Shewana3_2131 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella sp MR-4 | Shewmr4_2028 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella sp MR-7 | Shewmr7_1947 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella baltica OS155 | Sbal_2222 | -90 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella denitrificans OS217 | Sden_1786 | -83 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella frigidimarina NCIMB 400 | Sfri_1935 | -86 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella amazonensis SB2B | Sama_1709 | -81 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella loihica PV-4 | Shew_1925 | -105 | 5.7 | GTTTACGTTAACGTAACT |
| Shewanella pealeana ATCC 700345 | Spea_2246 | -91 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella halifaxensis HAW-EB4 | Shal_2234 | -92 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella piezotolerans WP3 | swp_2606 | -92 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella sediminis HAW-EB3 | Ssed_2329 | -103 | 6.2 | GTTTACGTTAACGTAATG |
| Shewanella woodyi ATCC 51908 | Swoo_2278 | -101 | 6.2 | GTTTACGTTAACGTAATG |