Propagation of SO1393 regulog to Shewanella loihica PV-4

Built upon 20 sites [see more]

Predicted regulatory interactions in *Shewanella loihica PV-4*
	Locus tag	Position	Score	Sequence
Position: -51 Score: 6.5 Sequence: AGTAGACAACTTGGTCTACC Locus tag: Shew_1679
	Shew_1679	-51	6.5	AGTAGACAACTTGGTCTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1393
Ortholog function: Transcriptional regulator, TetR family
Shewanella oneidensis MR-1	SO_1393	-129	5.1	AGTAGACAGATTTGTCTGTA
		-91	6.6	AGTAGACTGATTTGTCTACT
Shewanella sp ANA-3	Shewana3_2980	-98	5.9	GGTAGACCAATCTGTCTGCT
		-63	6.5	GGTAGACTGAGTTGTCTACC
Shewanella sp MR-4	Shewmr4_2801	-98	6	GGTAGACCAGTCTGTCTACC
		-63	6.5	AGTAGACTGAGTTGTCTACC
Shewanella sp MR-7	Shewmr7_2884	-98	5.6	TGTAGACCAGTCTGTCTACT
		-63	6.5	AGTAGACTGAGTTGTCTACC
Shewanella loihica PV-4	Shew_1679	-77	5.7	TGTAGACAAGTCTGTCTACC
		-51	6.5	AGTAGACAACTTGGTCTACC

Position: -97 Score: 6.5 Sequence: GGTAGACCAAGTTGTCTACT Locus tag: Shew_1680
	Shew_1680	-97	6.5	GGTAGACCAAGTTGTCTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1392
Ortholog function: hypothetical HPP domain-containing protein
Shewanella oneidensis MR-1	SO_1392	-203	6.6	AGTAGACAAATCAGTCTACT
		-165	5.1	TACAGACAAATCTGTCTACT
Shewanella sp ANA-3	Shewana3_2981	-208	6.5	GGTAGACAACTCAGTCTACC
		-173	5.9	AGCAGACAGATTGGTCTACC
Shewanella sp MR-4	Shewmr4_2802	-208	6.5	GGTAGACAACTCAGTCTACT
		-173	6	GGTAGACAGACTGGTCTACC
Shewanella sp MR-7	Shewmr7_2885	-208	6.5	GGTAGACAACTCAGTCTACT
		-173	5.6	AGTAGACAGACTGGTCTACA
Shewanella loihica PV-4	Shew_1680	-97	6.5	GGTAGACCAAGTTGTCTACT
		-71	5.7	GGTAGACAGACTTGTCTACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --