Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of MalR regulog to Shewanella baltica OS185

Reference regulog properties
Source regulog: MalR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella baltica OS185
Orthologous TF(s) Shew185_2345
Regulated genes 3
Built upon 67 sites [see more]
Predicted regulatory interactions in Shewanella baltica OS185
Locus tag Position Score Sequence
Position: -312
Score: 6
Sequence: AGTGCATACGTATTCAAT
Position: -163
Score: 6.2
Sequence: TCTGCATACGTATGCAGG
Locus tag: Shew185_2039
Shew185_2039 -312 6 AGTGCATACGTATTCAAT
-163 6.2 TCTGCATACGTATGCAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: malZ
Ortholog function: Maltodextrin glucosidase (EC 3.2.1.20)
Shewanella sp ANA-3 Shewana3_2311 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-4 Shewmr4_2133 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-7 Shewmr7_2209 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella baltica OS155 Sbal_2287 -312 6 AGTGCATACGTATTCAAT
-163 6.2 TCTGCATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2028 -292 6.1 TATGCATACGTATTCAAT
-143 6.2 TTTGCATACGTATGCAGT
Shewanella frigidimarina NCIMB 400 Sfri_1788 -296 6 TATGCATACGTATTCAAC
-147 6.2 TTTGCATACGTATGCAGG
Shewanella amazonensis SB2B Sama_1662 -317 6.1 AGTGCATACGTATTCAAA
-167 6.1 TGTGCATACGTATGCAGC
Shewanella loihica PV-4 Shew_1889 -311 6.1 TATGCATACGTATTCAAA
-160 6.2 TTTGCATACGTATGCAGT
Shewanella piezotolerans WP3 swp_2670 -303 6.1 TATGCATACGTATTCAAT
-154 5.9 ATTACATACGTATGCAGA
Shewanella woodyi ATCC 51908 Swoo_2210 -198 6.1 TATGCATACGTATTCAAA
-47 6.2 TATGCATACGTATGCAGA
Position: -90
Score: 5.9
Sequence: GGTGAATACGTATGCAGG
Locus tag: Shew185_2329
Shew185_2329 -90 5.9 GGTGAATACGTATGCAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: susB
Ortholog function: Alpha-glucosidase (EC 3.2.1.20)
Shewanella oneidensis MR-1 SO_2450 -90 5.4 GTGGAATACGTATGCAAG
Shewanella sp ANA-3 Shewana3_1931 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-4 Shewmr4_1876 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-7 Shewmr7_2102 -90 6 GGTGAATACGTATGCAAA
Shewanella baltica OS155 Sbal_2329 -90 5.9 GGTGAATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2002 -100 5.7 CCTGAATACGTATGTAGT
Shewanella frigidimarina NCIMB 400 Sfri_1777 -92 6.1 ACTGAATACGTATGCAAA
Shewanella amazonensis SB2B Sama_1108 -89 6 GCTGAATACGTATGCAGC
Shewanella loihica PV-4 Shew_1876 -164 5.9 GGTGAATACGTATGCAGC
Shewanella piezotolerans WP3 swp_2676 -111 6.1 TTTGAATACGTATGCAAG