Propagation of NagR regulog to Shewanella piezotolerans WP3

Reference regulog properties
Source regulog:	NagR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Shewanella piezotolerans WP3
Orthologous TF(s)	swp_3713
Regulated genes	8

Built upon 105 sites [see more]

Predicted regulatory interactions in *Shewanella piezotolerans WP3*
	Locus tag	Position	Score	Sequence
Position: -249 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: swp_0647
	swp_0647	-249	6.4	AATGACAACGCTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chiA
Ortholog function: Chitinase (EC 3.2.1.14)
Shewanella sp ANA-3	Shewana3_2984	-214	6.6	AATGACAACGTTGTCATT
Shewanella sp MR-4	Shewmr4_2805	-212	6.6	AATGACAACGTTGTCATT
Shewanella sp MR-7	Shewmr7_2888	-212	6.6	AATGACAACGTTGTCATT
Shewanella baltica OS155	Sbal_3083	-221	6.6	AATGACAACGTTGTCATT
Shewanella denitrificans OS217	Sden_2136	-212	6.4	AATGACAACGCTGTCATT
Shewanella piezotolerans WP3	swp_0647	-249	6.4	AATGACAACGCTGTCATT
Shewanella woodyi ATCC 51908	Swoo_1100	-306	6.4	GATGACAGCGTTGTCATC

Position: -182 Score: 5.2 Sequence: TGTGACAGCGCTGTCAAT Locus tag: swp_2992
	swp_2992	-182	5.2	TGTGACAGCGCTGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chiA3
Ortholog function: chitodextrinase
Shewanella piezotolerans WP3	swp_2992	-182	5.2	TGTGACAGCGCTGTCAAT

Position: -106 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: swp_3703
	swp_3703	-106	6.4	AATGACAACGCTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagK
Ortholog function: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Shewanella oneidensis MR-1	SO_3507	-115	6.4	AATGACAACGCTGTCATT
Shewanella putrefaciens CN-32	Sputcn32_1076	-90	6.4	AATGACAACGCTGTCATC
Shewanella sp W3-18-1	Sputw3181_3089	-90	6.4	AATGACAACGCTGTCATC
Shewanella sp ANA-3	Shewana3_3114	-114	6.4	AATGACAACGCTGTCATT
Shewanella sp MR-4	Shewmr4_2935	-114	6.4	AATGACAACGCTGTCATT
Shewanella sp MR-7	Shewmr7_3017	-114	6.4	AATGACAACGCTGTCATT
Shewanella baltica OS155	Sbal_1084	-113	6.4	AATGACAACGCTGTCATT
Shewanella denitrificans OS217	Sden_2706	-101	6.4	AATGACAACGCTGTCATT
Shewanella amazonensis SB2B	Sama_0944	-105	6.4	AATGACAACGCTGTCATT
Shewanella loihica PV-4	Shew_1116	-106	6.4	AATGACAGCGTTGTCATT
Shewanella pealeana ATCC 700345	Spea_1101	-123	6.4	AATGACAACGCTGTCATT
Shewanella halifaxensis HAW-EB4	Shal_1149	-124	6.4	AATGACAACGCTGTCATT
Shewanella piezotolerans WP3	swp_3703	-106	6.4	AATGACAACGCTGTCATT
Shewanella sediminis HAW-EB3	Ssed_1212	-106	6.4	AATGACAACGCTGTCATT
Shewanella woodyi ATCC 51908	Swoo_1312	-108	6.4	AATGACAACGCTGTCATT

Position: -277 Score: 5.9 Sequence: TATGACAGCGTTGTCATC Locus tag: swp_3707
	swp_3707	-277	5.9	TATGACAGCGTTGTCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pilM
Ortholog function: homolog of type IV pilus assembly protein PilM
Shewanella sp ANA-3	Shewana3_3117	-294	6.4	AATGACAACGCTGTCATC
Shewanella sp MR-4	Shewmr4_2938	-294	6.4	AATGACAACGCTGTCATC
Shewanella sp MR-7	Shewmr7_3020	-294	6.4	AATGACAACGCTGTCATC
Shewanella baltica OS155	Sbal_1081	-304	6.4	AATGACAACGCTGTCATC
Shewanella amazonensis SB2B	Sama_0941	-282	6.4	AATGACAGCGTTGTCATT
Shewanella piezotolerans WP3	swp_3707	-277	5.9	TATGACAGCGTTGTCATC
Shewanella woodyi ATCC 51908	Swoo_1309	-311	6.4	AATGACAGCGTTGTCATC

Position: -284 Score: 5.9 Sequence: GATGACAACGCTGTCATA Position: -129 Score: 5.4 Sequence: AATGACAACGCTGTCTAA Locus tag: swp_3708
	swp_3708	-284	5.9	GATGACAACGCTGTCATA
		-129	5.4	AATGACAACGCTGTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: duf81
Ortholog function: protein of unknown function DUF81
Shewanella sp ANA-3	Shewana3_3118	-66	5.2	TGTGACAACGCTGTCTTT
Shewanella sp MR-4	Shewmr4_2939	-68	5	TGTGACAACGCTGTCCTT
Shewanella sp MR-7	Shewmr7_3021	-68	5.2	TGTGACAACGCTGTCTTT
Shewanella baltica OS155	Sbal_1080	-210	6.4	GATGACAGCGTTGTCATT
		-64	5.4	TGTGACAACGTTGTCTTT
Shewanella piezotolerans WP3	swp_3708	-129	5.4	AATGACAACGCTGTCTAA
Shewanella woodyi ATCC 51908	Swoo_1308	-92	5.7	TATGACAACGCTGTCAAT

Position: -77 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: swp_3712
	swp_3712	-77	6.2	CATGACAGCGTTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp_nag
Ortholog function: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Shewanella piezotolerans WP3	swp_3712	-77	6.2	CATGACAGCGTTGTCATT

Position: -40 Score: 5.9 Sequence: TATGACAGCGTTGTCATT Locus tag: swp_3933
	swp_3933	-40	5.9	TATGACAGCGTTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cbp2
Ortholog function: putative chitn-binding protein, exported
Shewanella pealeana ATCC 700345	Spea_3159	-39	5.7	TTTGACAGCGTTGTCATT
Shewanella piezotolerans WP3	swp_3933	-40	5.9	TATGACAGCGTTGTCATT

Position: -91 Score: 6.4 Sequence: AATGACAGCGTTGTCATT Locus tag: swp_4289
	swp_4289	-91	6.4	AATGACAGCGTTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Shewanella loihica PV-4	Shew_0815	-119	6.4	AATGACAACGCTGTCATT
Shewanella pealeana ATCC 700345	Spea_0760	-182	6.4	AATGACAGCGTTGTCATT
Shewanella halifaxensis HAW-EB4	Shal_0813	-84	6.4	AATGACAGCGTTGTCATT
Shewanella piezotolerans WP3	swp_4289	-91	6.4	AATGACAGCGTTGTCATT
Shewanella sediminis HAW-EB3	Ssed_0844	-84	6.4	AATGACAGCGTTGTCATT
Shewanella woodyi ATCC 51908	Swoo_0943	-190	6.4	AATGACAGCGTTGTCATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NagR regulog to Shewanella piezotolerans WP3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --