Propagation of IlvY regulog to Shewanella piezotolerans WP3
| Source regulog: | IlvY - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Branched-chain amino acid biosynthesis |
| Effector: | Acetohydroxybutyrate; 2-Acetolactate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella piezotolerans WP3 |
| Orthologous TF(s) | swp_0357 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -112
Score: 4.9 Sequence: ATTGCTTAAAATGATAT
Locus tag: swp_0357
|
||||
| swp_0357 | -112 | 4.9 | ATTGCTTAAAATGATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvY | ||||
| Ortholog function: HTH-type transcriptional regulator IlvY | ||||
| Shewanella oneidensis MR-1 | SO_4350 | -97 | 4.8 | GTTGCTTAAAATGATAT |
| -66 | 5.1 | ATTGCGTTTTTTGCAAT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_3616 | -134 | 4.8 | GTTGCTTAAAATGATAT |
| -103 | 5 | ATTGCATTATTCGCAAC | ||
| Shewanella sp W3-18-1 | Sputw3181_3756 | -97 | 4.8 | GTTGCTTAAAATGATAT |
| -66 | 5 | ATTGCATTATTCGCAAC | ||
| Shewanella sp ANA-3 | Shewana3_0354 | -97 | 4.8 | GTTGCTTAAAATGATAT |
| -66 | 5.2 | ATTGCGTTTTATGCAAT | ||
| Shewanella sp MR-4 | Shewmr4_0360 | -97 | 4.8 | GTTGCTTAAAATGATAT |
| -66 | 5.2 | ATTGCGTTTTATGCAAT | ||
| Shewanella sp MR-7 | Shewmr7_3666 | -97 | 4.8 | GTTGCTTAAAATGATAT |
| -66 | 5.2 | ATTGCGTTTTATGCAAT | ||
| Shewanella baltica OS155 | Sbal_4033 | -163 | 4.9 | ATTGCTTAAAATGATAT |
| -132 | 4.8 | ATTGCATTATGCGCAAC | ||
| Shewanella denitrificans OS217 | Sden_3416 | -92 | 4.9 | ATTGCTTAAAATGATAT |
| -61 | 5 | GTTGCGTTTTTTGCAAT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_0420 | -110 | 4.9 | ATTGCTTAAAATGATAT |
| -79 | 5.1 | GTTGCAATTAATGCAAC | ||
| Shewanella amazonensis SB2B | Sama_3283 | -114 | 4.6 | ATTGCTCAAAATGATAT |
| -83 | 5 | ATTTCAATTTTTGCAAC | ||
| Shewanella loihica PV-4 | Shew_0287 | -101 | 4.9 | ATTGCTTAAAATGATAT |
| -70 | 5.3 | ATTGCATTTTTTGCAAT | ||
| Shewanella pealeana ATCC 700345 | Spea_0343 | -92 | 4.9 | ATTGCTTAAAATGATAT |
| -61 | 4.6 | GTTGCATCTTTTGCAAC | ||
| Shewanella halifaxensis HAW-EB4 | Shal_3946 | -93 | 4.9 | ATTGCTTAAAATGATAT |
| -62 | 5 | GTTGCGTTTTTTGCAAT | ||
| Shewanella piezotolerans WP3 | swp_0357 | -112 | 4.9 | ATTGCTTAAAATGATAT |
| -81 | 4.7 | GTTGCGTTTTGTGCAAC | ||
| Shewanella sediminis HAW-EB3 | Ssed_4167 | -132 | 4.9 | ATTGCTTAAAATGATAT |
| -101 | 4.6 | ATTGCGCTTTACGCAAC | ||
| Shewanella woodyi ATCC 51908 | Swoo_0440 | -87 | 4.9 | ATTGCTTAAAATGATAT |
| -56 | 5.2 | ATTGCAATTATTGCAAC | ||
|
Position: -107
Score: 4.9 Sequence: ATATCATTTTAAGCAAT
Locus tag: swp_0358
|
||||
| swp_0358 | -107 | 4.9 | ATATCATTTTAAGCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvC | ||||
| Ortholog function: Ketol-acid reductoisomerase (EC 1.1.1.86) | ||||
| Shewanella oneidensis MR-1 | SO_4349 | -147 | 5.1 | ATTGCAAAAAACGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella putrefaciens CN-32 | Sputcn32_3615 | -147 | 5 | GTTGCGAATAATGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella sp W3-18-1 | Sputw3181_3755 | -147 | 5 | GTTGCGAATAATGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella sp ANA-3 | Shewana3_0355 | -147 | 5.2 | ATTGCATAAAACGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella sp MR-4 | Shewmr4_0361 | -147 | 5.2 | ATTGCATAAAACGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella sp MR-7 | Shewmr7_3665 | -147 | 5.2 | ATTGCATAAAACGCAAT |
| -116 | 4.8 | ATATCATTTTAAGCAAC | ||
| Shewanella baltica OS155 | Sbal_4032 | -146 | 4.8 | GTTGCGCATAATGCAAT |
| -115 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella denitrificans OS217 | Sden_3415 | -199 | 5 | ATTGCAAAAAACGCAAC |
| -168 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_0421 | -146 | 5.1 | GTTGCATTAATTGCAAC |
| -115 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella amazonensis SB2B | Sama_3282 | -149 | 5 | GTTGCAAAAATTGAAAT |
| -118 | 4.6 | ATATCATTTTGAGCAAT | ||
| Shewanella loihica PV-4 | Shew_0288 | -139 | 5.3 | ATTGCAAAAAATGCAAT |
| -108 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella pealeana ATCC 700345 | Spea_0344 | -136 | 4.6 | GTTGCAAAAGATGCAAC |
| -105 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_3945 | -138 | 5 | ATTGCAAAAAACGCAAC |
| -107 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella piezotolerans WP3 | swp_0358 | -138 | 4.7 | GTTGCACAAAACGCAAC |
| -107 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella sediminis HAW-EB3 | Ssed_4166 | -139 | 4.6 | GTTGCGTAAAGCGCAAT |
| -108 | 4.9 | ATATCATTTTAAGCAAT | ||
| Shewanella woodyi ATCC 51908 | Swoo_0441 | -139 | 5.2 | GTTGCAATAATTGCAAT |
| -108 | 4.9 | ATATCATTTTAAGCAAT | ||