Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DeoR regulog to Shewanella benthica KT99

Reference regulog properties
Source regulog: DeoR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nucleoside utilization
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella benthica KT99
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Shewanella benthica KT99
Locus tag Position Score Sequence
Position: -145
Score: 5.8
Sequence: TGCGGACTTTTGTCCTAA
Locus tag: KT99_17326
KT99_17326 -145 5.8 TGCGGACTTTTGTCCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoT
Ortholog function: Predicted purine nucleoside transporter, MFS superfamily
Shewanella oneidensis MR-1 SO_2718 -73 6 TCCGGACTTTAGTCCTAA
Shewanella putrefaciens CN-32 Sputcn32_1658 -73 6 TCCGGACTTTAGTCCTAA
Shewanella sp W3-18-1 Sputw3181_2367 -73 6 TCCGGACTTTAGTCCTAA
Shewanella sp ANA-3 Shewana3_2502 -73 5.8 AGCGGACTTTAGTCCTAA
Shewanella pealeana ATCC 700345 Spea_3785 -72 5.5 TGCGGACTTATGTCCTCT
Shewanella halifaxensis HAW-EB4 Shal_3870 -72 5.5 TGCGGACTAATGTCCTCT
Shewanella sediminis HAW-EB3 Ssed_3272 -93 5.8 TGCGGACTTTTGTCCTAA
Shewanella woodyi ATCC 51908 Swoo_3423 -116 5.3 TGCGGACTTTTGTCCTTA
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