Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FabR regulog to Alteromonas macleodii 'Deep ecotype'

Reference regulog properties
Source regulog: FabR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonas macleodii 'Deep ecotype'
Orthologous TF(s) MADE_03580
Regulated genes 4
Built upon 118 sites [see more]
Predicted regulatory interactions in Alteromonas macleodii 'Deep ecotype'
Locus tag Position Score Sequence
Position: -121
Score: 5.3
Sequence: ATCGGACAAGTGTACGCT
Locus tag: MADE_01586
MADE_01586 -121 5.3 ATCGGACAAGTGTACGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: plsC
Ortholog function: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
Shewanella oneidensis MR-1 SO_0567 -80 4.9 AGCTTACAGATGTAAACA
Shewanella putrefaciens CN-32 Sputcn32_3308 -38 4.6 GGCTTACAGATGTAAACA
Shewanella sp W3-18-1 Sputw3181_0633 -38 4.6 GGCTTACAGATGTAAACA
Shewanella sp ANA-3 Shewana3_0568 -41 4.9 AGCTTACAGATGTAAACA
Shewanella sp MR-4 Shewmr4_0569 -41 4.9 AGCTTACAGATGTAAACA
Shewanella sp MR-7 Shewmr7_3461 -41 4.9 AGCTTACAGATGTAAACA
Shewanella baltica OS155 Sbal_0529 -80 4.9 AGCTTACAGATGTAAACA
Shewanella denitrificans OS217 Sden_0530 -80 4.9 AGCGTACATATGTAAACA
Shewanella frigidimarina NCIMB 400 Sfri_3514 -80 4.9 AGCGTACATATGTAAACA
Shewanella amazonensis SB2B Sama_3139 -80 4.8 AGCGCACACGTGTAAACA
Shewanella pealeana ATCC 700345 Spea_3713 -104 4.8 AGGCTACACGTGTAAACT
Shewanella halifaxensis HAW-EB4 Shal_3798 -104 4.8 AGGCTACACGTGTAAACT
Shewanella piezotolerans WP3 swp_0559 -116 4.6 AGGCTACATGTGTAAACT
Position: -126
Score: 5.7
Sequence: AGCGAACAAGTGTGCGCT
Locus tag: MADE_03143
MADE_03143 -126 5.7 AGCGAACAAGTGTGCGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hylII
Ortholog function: COG1272: Predicted membrane protein hemolysin III homolog
Shewanella oneidensis MR-1 SO_2447 -114 6.5 AGCGTACACGTGTAAGCT
Shewanella putrefaciens CN-32 Sputcn32_1920 -85 6.3 AGCTTACAAGTGTACGCT
Shewanella sp W3-18-1 Sputw3181_2088 -85 6.3 AGCTTACAAGTGTACGCT
Shewanella sp ANA-3 Shewana3_1934 -84 6.4 AGCTTACACGTGTAAGCT
Shewanella sp MR-4 Shewmr4_1879 -84 6.4 AGCTTACACGTGTAAGCT
Shewanella sp MR-7 Shewmr7_2099 -84 6.4 AGCTTACACGTGTAAGCT
Shewanella baltica OS155 Sbal_2325 -85 6.3 AGCTTACAAGTGTACGCT
Shewanella denitrificans OS217 Sden_1768 -84 5.9 AGCTTACACGCGTACGCT
Shewanella frigidimarina NCIMB 400 Sfri_1873 -94 5.4 AGCTTACACGTGTTCACC
Shewanella amazonensis SB2B Sama_1862 -89 5.8 AGCGTACACATGTACTCT
Shewanella loihica PV-4 Shew_2098 -90 6.1 GGCGTACACATGTACGCT
Shewanella pealeana ATCC 700345 Spea_2385 -36 6.3 AGCTTACACGTGTTCGCT
Shewanella halifaxensis HAW-EB4 Shal_1898 -87 6.1 AGCGTACACGTGTGCGCT
Shewanella piezotolerans WP3 swp_2328 -130 6.3 AGCTAACACGTGTACGCT
Shewanella sediminis HAW-EB3 Ssed_2012 -88 6.6 AGCGTACACGTGTACGCT
Shewanella woodyi ATCC 51908 Swoo_2594 -88 6.5 AGCTTACACGTGTACGCT
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