Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NagR regulog to Shewanella violacea DSS12

Reference regulog properties
Source regulog: NagR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella violacea DSS12
Orthologous TF(s) SVI_1015
Regulated genes 2
Built upon 105 sites [see more]
Predicted regulatory interactions in Shewanella violacea DSS12
Locus tag Position Score Sequence
Position: -298
Score: 6.4
Locus tag: SVI_0856
Supported by regulated orthologs from reference regulons
Ortholog gene name: chiA
Ortholog function: Chitinase (EC
Shewanella sp ANA-3 Shewana3_2984 -214 6.6 AATGACAACGTTGTCATT
Shewanella sp MR-4 Shewmr4_2805 -212 6.6 AATGACAACGTTGTCATT
Shewanella sp MR-7 Shewmr7_2888 -212 6.6 AATGACAACGTTGTCATT
Shewanella baltica OS155 Sbal_3083 -221 6.6 AATGACAACGTTGTCATT
Shewanella denitrificans OS217 Sden_2136 -212 6.4 AATGACAACGCTGTCATT
Shewanella piezotolerans WP3 swp_0647 -249 6.4 AATGACAACGCTGTCATT
Shewanella woodyi ATCC 51908 Swoo_1100 -306 6.4 GATGACAGCGTTGTCATC