Propagation of NarP regulog to Shewanella violacea DSS12
| Source regulog: | NarP - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Shewanella violacea DSS12 |
| Orthologous TF(s) | SVI_0761 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -59
Score: 4.1 Sequence: TAACCATAAATAATTA
Locus tag: SVI_3701
|
||||
| SVI_3701 | -59 | 4.1 | TAACCATAAATAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: omp35 | ||||
| Ortholog function: Outer membrane porin, predicted | ||||
| Shewanella oneidensis MR-1 | SO3896 | -255 | 5.2 | TACCTCTTTAGTGGTA |
| Shewanella sp ANA-3 | Shewana3_0733 | -255 | 5.1 | TACCTCTTTAGTAGTA |
| Shewanella sp MR-4 | Shewmr4_3228 | -255 | 5.1 | TACCTCTTTAGTAGTA |
| Shewanella sp MR-7 | Shewmr7_0761 | -255 | 5.1 | TACCTCTTTAGTAGTA |
| Shewanella baltica OS155 | Sbal_3570 | -256 | 4.9 | TACCACTTAAGTAGTA |
| Shewanella frigidimarina NCIMB 400 | Sfri_0503 | -243 | 4.3 | CATCCCTAAAGAGGTA |
| Shewanella loihica PV-4 | Shew_3260 | -261 | 4.9 | TACCCCTTTGGGAGTA |
| Shewanella pealeana ATCC 700345 | Spea_0589 | -260 | 4.6 | CACCTCTTTATAGATA |
| Shewanella halifaxensis HAW-EB4 | Shal_0676 | -260 | 4.8 | TACTCCTTTAGGGATA |
| Shewanella piezotolerans WP3 | swp_4514 | -260 | 5.1 | TACCCCTTTAGGGATA |
| Shewanella sediminis HAW-EB3 | Ssed_4009 | -263 | 4.1 | TACTTCGTTCTAGGTA |