Propagation of SO3627 regulog to Shewanella sediminis HAW-EB3
| Source regulog: | SO3627 - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella sediminis HAW-EB3 |
| Orthologous TF(s) | Ssed_4177 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -96
Score: 7 Sequence: TTTTTGTGGTGTACCTCAAGAA
Locus tag: Ssed_4177
|
||||
| Ssed_4177 | -96 | 7 | TTTTTGTGGTGTACCTCAAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3627 | ||||
| Ortholog function: Transcriptional regulator, TetR family | ||||
| Shewanella oneidensis MR-1 | SO_3627 | -99 | 6.9 | TTTTTGAGTTGTATCTCAAGAA |
| Shewanella sediminis HAW-EB3 | Ssed_4177 | -96 | 7 | TTTTTGTGGTGTACCTCAAGAA |
|
Position: -113
Score: 7 Sequence: TTCTTGAGGTACACCACAAAAA
Locus tag: Ssed_4178
|
||||
| Ssed_4178 | -113 | 7 | TTCTTGAGGTACACCACAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3624 | ||||
| Ortholog function: Flavocytochrome c flavin subunit | ||||
| Shewanella oneidensis MR-1 | SO_3624 | -1477 | 6.9 | TTCTTGAGaTACAaCTCAAAAA |
| Shewanella sediminis HAW-EB3 | Ssed_4178 | -113 | 7 | TTCTTGAGGTACACCACAAAAA |