Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SO1758 regulog to Shewanella sediminis HAW-EB3

Reference regulog properties
Source regulog: SO1758 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process:
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sediminis HAW-EB3
Orthologous TF(s) Ssed_2785
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Shewanella sediminis HAW-EB3
Locus tag Position Score Sequence
Position: -71
Score: 6.5
Sequence: ACTGACACTACGCTGTCAGT
Locus tag: Ssed_2787
Ssed_2787 -71 6.5 ACTGACACTACGCTGTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1756
Ortholog function: Glyoxalase family protein
Shewanella oneidensis MR-1 SO_1756 -104 6.8 ACTGACATGATGCTGTCAGT
Shewanella putrefaciens CN-32 Sputcn32_1455 -122 7 ACTGACATCATGCTGTCAGT
Shewanella sp W3-18-1 Sputw3181_2647 -122 7 ACTGACATCATGCTGTCAGT
Shewanella sp ANA-3 Shewana3_2706 -110 6.7 ACTGACATGATGTTGTCAGT
Shewanella sp MR-4 Shewmr4_2540 -110 6.7 ACTGACATGATGTTGTCAGT
Shewanella sp MR-7 Shewmr7_2607 -110 6.7 ACTGACATGATGTTGTCAGT
Shewanella baltica OS155 Sbal_1562 -121 7 ACTGACATCATGCTGTCAGT
Shewanella amazonensis SB2B Sama_1190 -114 6.4 GCTGACACCATGTTGTCAGC
Shewanella loihica PV-4 Shew_2543 -105 6.5 ACTGACACTAGGCTGTCAGT
Shewanella sediminis HAW-EB3 Ssed_2787 -71 6.5 ACTGACACTACGCTGTCAGT
Shewanella woodyi ATCC 51908 Swoo_3144 -100 6.8 ACTGACACTATGGTGTCAGT
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