Propagation of BetI regulog to Shewanella sediminis HAW-EB3
| Source regulog: | BetI - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Osmotic stress response |
| Effector: | Betaine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella sediminis HAW-EB3 |
| Orthologous TF(s) | Ssed_1121 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -73
Score: 7.5 Sequence: TTAATTGAACGTTCAATTAA
Locus tag: Ssed_1121
|
||||
| Ssed_1121 | -73 | 7.5 | TTAATTGAACGTTCAATTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: betI | ||||
| Ortholog function: glycine betaine biosynthesis transcriptional regulator, TetR family | ||||
| Shewanella baltica OS155 | Sbal_1323 | -63 | 7 | TGGATTGAACGTTCAATTAA |
| Shewanella denitrificans OS217 | Sden_0713 | -46 | 7.5 | TTAATTGAACGTTCAATTAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_1948 | -51 | 7.2 | TTAATTGAGCGTTCAATTAA |
| Shewanella pealeana ATCC 700345 | Spea_1009 | -97 | 7.3 | TTAATTGAACGTTCAATCAA |
| Shewanella halifaxensis HAW-EB4 | Shal_1059 | -96 | 7.3 | TTAATTGAACGTTCAATCAA |
| Shewanella sediminis HAW-EB3 | Ssed_1121 | -73 | 7.5 | TTAATTGAACGTTCAATTAA |
| Shewanella woodyi ATCC 51908 | Swoo_1198 | -83 | 7.5 | TTAATTGAACGTTCAATTAA |