Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AzrR regulog to Shewanella sediminis HAW-EB3

Reference regulog properties
Source regulog: AzrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Superoxide stress response
Effector: Paraquat
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sediminis HAW-EB3
Orthologous TF(s) Ssed_0995
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Shewanella sediminis HAW-EB3
Locus tag Position Score Sequence
Position: -64
Score: 6.3
Sequence: CTTTACAACATTTAGTAAAG
Locus tag: Ssed_0994
Ssed_0994 -64 6.3 CTTTACAACATTTAGTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: azr
Ortholog function: NADPH-dependent FMN reductase
Shewanella oneidensis MR-1 SO_3585 -62 6.5 CTTTACAAGATTAAATAAAG
Shewanella putrefaciens CN-32 Sputcn32_1017 -100 5.1 CTTTAACAGATTAAATAAAC
-62 6.5 CTTTACAAGATTAAATAAAG
Shewanella sp W3-18-1 Sputw3181_3148 -100 5.1 CTTTAACAGATTAAATAAAC
-62 6.5 CTTTACAAGATTAAATAAAG
Shewanella sp ANA-3 Shewana3_3177 -62 6.5 CTTTACAAGATTAAATAAAG
Shewanella sp MR-4 Shewmr4_2999 -62 6.5 CTTTACAAGATTAAATAAAG
Shewanella sp MR-7 Shewmr7_3080 -62 6.5 CTTTACAAGATTAAATAAAG
Shewanella baltica OS155 Sbal_1010 -100 5.4 CTTTAATAGATTAAATAAAC
-62 6.5 CTTTACAAGATTAAATAAAG
Shewanella amazonensis SB2B Sama_2787 -77 6.7 CTTTACATAATTAAGTAAAG
Shewanella loihica PV-4 Shew_0914 -63 6.6 CTTTACAAAATTAAATAAAG
Shewanella pealeana ATCC 700345 Spea_0887 -65 5.6 CTTTACTTTGTTTGGTAAAG
Shewanella halifaxensis HAW-EB4 Shal_0939 -65 5.4 CTTTACTTTGTTTTGTAAGG
Shewanella piezotolerans WP3 swp_0891 -64 6.3 CTTTACTTTATTATGTAAAG
Shewanella sediminis HAW-EB3 Ssed_0994 -64 6.3 CTTTACAACATTTAGTAAAG
Shewanella woodyi ATCC 51908 Swoo_1047 -63 5.9 CTTTACATTACTTAGTAAAG
Position: -99
Score: 6.3
Sequence: CTTTACTAAATGTTGTAAAG
Locus tag: Ssed_0995
Ssed_0995 -99 6.3 CTTTACTAAATGTTGTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: azrR
Ortholog function: putative transcriptional regulator of azoreductase, AsnC family
Shewanella oneidensis MR-1 SO_3584 -104 6.5 CTTTATTTAATCTTGTAAAG
Shewanella putrefaciens CN-32 Sputcn32_1018 -104 6.5 CTTTATTTAATCTTGTAAAG
-66 5.1 GTTTATTTAATCTGTTAAAG
Shewanella sp W3-18-1 Sputw3181_3147 -104 6.5 CTTTATTTAATCTTGTAAAG
-66 5.1 GTTTATTTAATCTGTTAAAG
Shewanella sp ANA-3 Shewana3_3176 -104 6.5 CTTTATTTAATCTTGTAAAG
Shewanella sp MR-4 Shewmr4_2998 -104 6.5 CTTTATTTAATCTTGTAAAG
Shewanella sp MR-7 Shewmr7_3079 -104 6.5 CTTTATTTAATCTTGTAAAG
Shewanella baltica OS155 Sbal_1011 -105 6.5 CTTTATTTAATCTTGTAAAG
-67 5.4 GTTTATTTAATCTATTAAAG
Shewanella amazonensis SB2B Sama_2786 -106 6.7 CTTTACTTAATTATGTAAAG
Shewanella loihica PV-4 Shew_0915 -97 6.6 CTTTATTTAATTTTGTAAAG
Shewanella pealeana ATCC 700345 Spea_0888 -104 5.6 CTTTACCAAACAAAGTAAAG
Shewanella halifaxensis HAW-EB4 Shal_0940 -92 5.4 CCTTACAAAACAAAGTAAAG
Shewanella piezotolerans WP3 swp_0892 -80 6.3 CTTTACATAATAAAGTAAAG
Shewanella sediminis HAW-EB3 Ssed_0995 -99 6.3 CTTTACTAAATGTTGTAAAG
Shewanella woodyi ATCC 51908 Swoo_1048 -104 5.9 CTTTACTAAGTAATGTAAAG