Propagation of TyrR regulog to Shewanella baltica OS195
| Source regulog: | TyrR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TyrR |
| Regulation mode: | activator |
| Biological process: | Amino acid utilization |
| Effector: | Tyrosine; Phenylalanine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella baltica OS195 |
| Orthologous TF(s) | Sbal195_1517 |
| Regulated genes | 25 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -159
Score: 4.6 Sequence: GTGTAAATAAAAAATGGCAT
Locus tag: Sbal195_0304
|
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| Sbal195_0304 | -159 | 4.6 | GTGTAAATAAAAAATGGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tdo | ||||
| Ortholog function: tryptophan 2,3-dioxygenase | ||||
| Shewanella oneidensis MR-1 | SO_4414 | -175 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella putrefaciens CN-32 | Sputcn32_0406 | -179 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella sp W3-18-1 | Sputw3181_0260 | -179 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella sp ANA-3 | Shewana3_0294 | -179 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella sp MR-4 | Shewmr4_0294 | -179 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella sp MR-7 | Shewmr7_3725 | -180 | 4.5 | GTGTAAATAAAAAGTGGCAT |
| Shewanella baltica OS155 | Sbal_0303 | -159 | 4.6 | GTGTAAATAAAAAATGGCAT |
| Shewanella denitrificans OS217 | Sden_3451 | -122 | 4.3 | TCGGAAGTTAAACTTTACAT |
|
Position: -295
Score: 3.9 Sequence: ATTTAATTCAAATTTTCCAA
Locus tag: Sbal195_1343
|
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| Sbal195_1343 | -295 | 3.9 | ATTTAATTCAAATTTTCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceB | ||||
| Ortholog function: Malate synthase (EC 2.3.3.9) | ||||
| Shewanella oneidensis MR-1 | SO_1483 | -372 | 3.7 | GTGTAATCATTGTTTTTCGA |
| Shewanella putrefaciens CN-32 | Sputcn32_1238 | -304 | 4.7 | GTGTAATTATAAATTTACGT |
| Shewanella sp W3-18-1 | Sputw3181_2866 | -303 | 4.5 | GTGTAATTATAAATTTACTT |
| Shewanella sp ANA-3 | Shewana3_2943 | -372 | 4.3 | CTGTATATTTAAATTTTCAA |
| Shewanella sp MR-4 | Shewmr4_2767 | -372 | 4.3 | CTGTATAGTTAAATTTTCAA |
| Shewanella sp MR-7 | Shewmr7_2845 | -372 | 3.8 | CTGTACATTTAAATTTTCAG |
| Shewanella baltica OS155 | Sbal_1316 | -380 | 3.6 | CTGTATTAATATATTTACTG |
| Shewanella denitrificans OS217 | Sden_1245 | -324 | 4 | TTGTAAGTTATTATTTACTG |
| Shewanella frigidimarina NCIMB 400 | Sfri_1101 | -458 | 4.4 | tgGTAAAGaaAtATTTACAg |
| Shewanella amazonensis SB2B | Sama_2381 | -450 | 4.1 | TTGTAAATTAAATATTAAAT |
| -364 | 3.7 | GTGTATTAAAAATCTTACAG | ||
| Shewanella loihica PV-4 | Shew_1275 | -393 | 3.4 | CTGTATCGACAAAATTACTA |
| Shewanella pealeana ATCC 700345 | Spea_1290 | -415 | 3.9 | GTGGCAATAATTGTTAACGA |
| Shewanella halifaxensis HAW-EB4 | Shal_1352 | -458 | 4.1 | aTGTAAAagTAtATTgACgC |
| Shewanella piezotolerans WP3 | swp_1433 | -412 | 4.2 | CTGTATTTATAATATTACAC |
| Shewanella sediminis HAW-EB3 | Ssed_1414 | -371 | 4.2 | CTGTAAGTTTATTTTTACGC |
| Shewanella woodyi ATCC 51908 | Swoo_1528 | -401 | 3.9 | GTGTATCATTAAGTTTACTT |
| -341 | 3.6 | TTGGTAAATTTGTCTGACAA | ||
|
Position: -122
Score: 4.4 Sequence: TTGTAATATTTGCTTTACGT
Locus tag: Sbal195_1515
|
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| Sbal195_1515 | -122 | 4.4 | TTGTAATATTTGCTTTACGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: phhA | ||||
| Ortholog function: Phenylalanine-4-hydroxylase (EC 1.14.16.1) | ||||
| Shewanella oneidensis MR-1 | SO_1666 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella putrefaciens CN-32 | Sputcn32_1386 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella sp W3-18-1 | Sputw3181_2715 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella sp ANA-3 | Shewana3_2781 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella sp MR-4 | Shewmr4_2607 | -122 | 4.4 | TTGTAATATTTACTTTACGT |
| Shewanella sp MR-7 | Shewmr7_2674 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella baltica OS155 | Sbal_1484 | -122 | 4.4 | TTGTAATATTTGCTTTACGT |
| Shewanella denitrificans OS217 | Sden_2595 | -127 | 4.4 | TTGTATGCTTAAGTTTACAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_1328 | -121 | 4.1 | TTGTATTTATTTGTTTACGA |
| Shewanella amazonensis SB2B | Sama_2222 | -123 | 4.3 | TTGTAATAAAAGCTTTACGA |
| Shewanella loihica PV-4 | Shew_1435 | -87 | 4.7 | ATGTAAATTTGAGGTTACAT |
| Shewanella pealeana ATCC 700345 | Spea_1448 | -239 | 4.3 | GTGTCAATTTCTATATACGC |
| -173 | 4.8 | GTGTAACATTAGCATTACAC | ||
| Shewanella halifaxensis HAW-EB4 | Shal_1531 | -133 | 4.3 | GTGTAACAACTTCGTTACAC |
| Shewanella piezotolerans WP3 | swp_1650 | -188 | 4.6 | CTGTAAATTATGGCTTACAA |
| -123 | 4.5 | ATGTAAACTTATGGTTACGC | ||
| Shewanella sediminis HAW-EB3 | Ssed_2930 | -188 | 3.7 | TCGTCAATAAATGGTGACGA |
| -122 | 4.2 | TTGTAAGCAAATTGTTACAC | ||
| Shewanella woodyi ATCC 51908 | Swoo_1715 | -186 | 3.8 | TTGGCAATAATTCAATACGA |
| -121 | 4.6 | GTGTAACTTTTTGGTTACAA | ||
|
Position: -196
Score: 4.7 Sequence: CTGTAAACTAGGCTTGCCAC
Locus tag: Sbal195_1517
|
||||
| Sbal195_1517 | -196 | 4.7 | CTGTAAACTAGGCTTGCCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrR | ||||
| Ortholog function: Transcriptional regulator of aromatic amino acid biosynthesis | ||||
| Shewanella oneidensis MR-1 | SO_1669 | -190 | 4.7 | CTGTAAACTAGGCTTGCCAC |
| Shewanella putrefaciens CN-32 | Sputcn32_1388 | -188 | 4.8 | CTGTAAACTTGACTTGCCAC |
| Shewanella sp W3-18-1 | Sputw3181_2713 | -188 | 4.8 | CTGTAAACTTGACTTGCCAC |
| Shewanella sp ANA-3 | Shewana3_2779 | -205 | 4.7 | CTGTAAACTAGACTTGCCAC |
| Shewanella sp MR-4 | Shewmr4_2605 | -205 | 4.7 | CTGTAAACTAGACTTGCCAC |
| Shewanella sp MR-7 | Shewmr7_2672 | -205 | 4.7 | CTGTAAACTAGACTTGCCAC |
| Shewanella baltica OS155 | Sbal_1486 | -196 | 4.7 | CTGTAAACTAGGCTTGCCAC |
| Shewanella denitrificans OS217 | Sden_2593 | -155 | 4.6 | CTGTAAACAAGACTTGCCAC |
| Shewanella frigidimarina NCIMB 400 | Sfri_1330 | -92 | 4.7 | CTGTAAACTTCACTTGCCAC |
| Shewanella amazonensis SB2B | Sama_2220 | -134 | 4.6 | CTGTAAACAAGACTTGCCAC |
| Shewanella loihica PV-4 | Shew_1437 | -162 | 4.7 | GTGTAAACAACTCTTGCCAC |
| Shewanella pealeana ATCC 700345 | Spea_1450 | -158 | 4.6 | CTGTAAACAAGTCTTGCCAC |
| Shewanella halifaxensis HAW-EB4 | Shal_1533 | -159 | 4.1 | CTGTAAACAAGCCTTGCCAC |
| Shewanella piezotolerans WP3 | swp_1652 | -309 | 4.6 | cTGTAAAcaagtCTTgcCAC |
| Shewanella sediminis HAW-EB3 | Ssed_2928 | -151 | 4.6 | CTGTAAACAAGACTTGCCAC |
| Shewanella woodyi ATCC 51908 | Swoo_1717 | -161 | 4.6 | CTGTAAACAAGACTTGCCAC |
|
Position: -274
Score: 4 Sequence: ACGTAATGATTAGTTTACGA
Locus tag: Sbal195_1518
|
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| Sbal195_1518 | -274 | 4 | ACGTAATGATTAGTTTACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmgC | ||||
| Ortholog function: Fumarylacetoacetase (EC 3.7.1.2) | ||||
| Shewanella oneidensis MR-1 | SO_1670 | -323 | 3.8 | ATGTAACAGTATCGTTCCAC |
| -239 | 4.3 | ACGTAATGATTAGTTTACAG | ||
| Shewanella putrefaciens CN-32 | Sputcn32_1389 | -352 | 3.9 | ATGTAACCGTATCGTTCCAC |
| -268 | 4 | ACGTAATGATTAGTTTACGA | ||
| Shewanella sp W3-18-1 | Sputw3181_2712 | -352 | 3.9 | ATGTAACCGTATCGTTCCAC |
| -268 | 4 | ACGTAATGATTAGTTTACGA | ||
| Shewanella sp ANA-3 | Shewana3_2778 | -320 | 3.8 | ATGTAACAGTATCGTTCCAC |
| -236 | 4.4 | ACGTAATGATTAGTTTACAA | ||
| Shewanella sp MR-4 | Shewmr4_2604 | -319 | 3.8 | ATGTAACAGTATCGTTCCAC |
| -235 | 4.4 | ACGTAATGATTAGTTTACAA | ||
| Shewanella sp MR-7 | Shewmr7_2671 | -319 | 3.8 | ATGTAACAGTATCGTTCCAC |
| -235 | 4.4 | ACGTAATGATTAGTTTACAA | ||
| Shewanella baltica OS155 | Sbal_1487 | -358 | 3.8 | ATGTAACAGTATCGTTCCAC |
| -274 | 4 | ACGTAATGATTAGTTTACGA | ||
| Shewanella denitrificans OS217 | Sden_2592 | -228 | 4.1 | ATGTAACGAATTAGTGCCAT |
| -146 | 4.1 | TTGTACTGAAAAGTTTACAG | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1331 | -155 | 4.9 | TTGTAACGAATAATTTACAA |
| Shewanella amazonensis SB2B | Sama_2219 | -234 | 4.3 | GTGTAAAAAGAATTTGCCAG |
| -150 | 4.4 | CTGTATTTAAAAGTTTACAA | ||
| Shewanella loihica PV-4 | Shew_1438 | -169 | 4.5 | CTGTCATGAATTGTTTACAA |
| Shewanella pealeana ATCC 700345 | Spea_1451 | -197 | 4.8 | GTGTATCTATAAGTTTACAC |
| Shewanella halifaxensis HAW-EB4 | Shal_1534 | -183 | 4.7 | CTGTAAGTATAAGTTTACAA |
| Shewanella piezotolerans WP3 | swp_1653 | -179 | 4.8 | CTGTAATTATATGTTTACAA |
| Shewanella sediminis HAW-EB3 | Ssed_2927 | -238 | 4 | ATGTAAAAGCTTGTTGCCAC |
| -155 | 4 | GTGTAACTGTTTATTTACGT | ||
| Shewanella woodyi ATCC 51908 | Swoo_1718 | -256 | 4.2 | ATGTAACAAGAGATTGCCAC |
| -172 | 4.8 | CTGTAATTATTTATTTACAA | ||
|
Position: -162
Score: 4.3 Sequence: CTGTAAATCCTTACTGACAT
Locus tag: Sbal195_1525
|
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| Sbal195_1525 | -162 | 4.3 | CTGTAAATCCTTACTGACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ivdA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Shewanella oneidensis MR-1 | SO_1677 | -159 | 4.4 | CTGTAAATCCTGACTGACAA |
| Shewanella putrefaciens CN-32 | Sputcn32_1397 | -167 | 4.3 | CTGTAAATCCTTACTGACAA |
| Shewanella sp W3-18-1 | Sputw3181_2704 | -167 | 4.3 | CTGTAAATCCTTACTGACAA |
| Shewanella sp ANA-3 | Shewana3_2771 | -159 | 4.4 | CTGTAAATCCTGACTGACAA |
| Shewanella sp MR-4 | Shewmr4_2597 | -159 | 4.4 | CTGTAAATCCTGACTGACAA |
| Shewanella sp MR-7 | Shewmr7_2664 | -159 | 4.4 | CTGTAAATCCTGACTGACAA |
| Shewanella baltica OS155 | Sbal_1495 | -162 | 4.3 | CTGTAAATCCTTACTGACAT |
| Shewanella denitrificans OS217 | Sden_1943 | -159 | 4.4 | GTGTAAATCTTCAGTGACAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_1338 | -140 | 4.1 | CTGTAAATCTTCACTGACAA |
| Shewanella amazonensis SB2B | Sama_1375 | -195 | 3.8 | GTGTCAATCTCAGTTCCCGC |
| -173 | 4.6 | CTGTAAATCCAGAGTGACAA | ||
| Shewanella loihica PV-4 | Shew_1667 | -168 | 4.4 | CTGTAAATTCAGCCTGACAA |
| Shewanella pealeana ATCC 700345 | Spea_2783 | -231 | 4.5 | GTGTAAATTCTATGTGACAA |
| Shewanella halifaxensis HAW-EB4 | Shal_2878 | -231 | 4.4 | GTGTAAATCCTTTGTGACAT |
| Shewanella piezotolerans WP3 | swp_3387 | -75 | 3.8 | TTTTAAGTTGATGTTTACAC |
| Shewanella sediminis HAW-EB3 | Ssed_1473 | -185 | 4.5 | CTGTAAATCCTGAGTGACAT |
| Shewanella woodyi ATCC 51908 | Swoo_3202 | -173 | 4.7 | CTGTAAATCTTGAGTGACAT |
|
Position: -199
Score: 4.1 Sequence: ATGTAACAAGTTAATTACAC
Locus tag: Sbal195_1645
|
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| Sbal195_1645 | -199 | 4.1 | ATGTAACAAGTTAATTACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mdeA | ||||
| Ortholog function: Methionine gamma-lyase (EC 4.4.1.11) | ||||
| Shewanella oneidensis MR-1 | SO_1812 | -197 | 3.9 | ATGTAACAACTTAGTTACAG |
| Shewanella putrefaciens CN-32 | Sputcn32_1507 | -210 | 4.1 | ATGTAACAAGTTAATTACAC |
| Shewanella sp W3-18-1 | Sputw3181_2594 | -210 | 4.1 | ATGTAACAAGTTAATTACAC |
| Shewanella sp ANA-3 | Shewana3_2643 | -208 | 3.9 | ATGTAACAACTTAGTTACAG |
| Shewanella sp MR-4 | Shewmr4_2477 | -208 | 3.9 | ATGTAACAACTTAGTTACAG |
| Shewanella sp MR-7 | Shewmr7_2545 | -208 | 3.9 | ATGTAACAACTTAGTTACAG |
| Shewanella baltica OS155 | Sbal_1622 | -199 | 4.1 | ATGTAACAAGTTAATTACAC |
| Shewanella denitrificans OS217 | Sden_2521 | -152 | 4.3 | ATGTAACATAGTTTTTACAT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1369 | -148 | 4.7 | TTGTAAAATTGTTTTTACAT |
| Shewanella pealeana ATCC 700345 | Spea_2664 | -215 | 4 | ACGTAACAATCACTTTACAA |
| Shewanella halifaxensis HAW-EB4 | Shal_2751 | -214 | 4.4 | TTGTAACATTCAGTTTACAA |
| Shewanella piezotolerans WP3 | swp_3243 | -242 | 4.1 | ACGTAACATATATTTTACAA |
|
Position: -160
Score: 4.9 Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sbal195_2199
|
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| Sbal195_2199 | -160 | 4.9 | TTGTAAAGCAATATATACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bkdA1 | ||||
| Ortholog function: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) | ||||
| Shewanella oneidensis MR-1 | SO_2339 | -160 | 4.9 | TTGTAAAGCAATATATACAT |
| Shewanella putrefaciens CN-32 | Sputcn32_1885 | -160 | 4.9 | TTGTAAAGCAATATATACAT |
| Shewanella sp W3-18-1 | Sputw3181_2123 | -160 | 4.9 | TTGTAAAGCAATATATACAT |
| Shewanella sp ANA-3 | Shewana3_2131 | -160 | 4.8 | TTGTAAAGCATTATATACAT |
| Shewanella sp MR-4 | Shewmr4_2028 | -160 | 4.8 | TTGTAAAGCATTATATACAT |
| Shewanella sp MR-7 | Shewmr7_1947 | -160 | 4.8 | TTGTAAAGCATTATATACAT |
| Shewanella baltica OS155 | Sbal_4508 | -160 | 4.9 | TTGTAAAGCAATATATACAT |
| Shewanella denitrificans OS217 | Sden_1786 | -153 | 4.5 | GCGTAAAGCAAATTATACAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_1935 | -156 | 4.5 | TCGTAAAGCAATATATACAT |
| Shewanella amazonensis SB2B | Sama_1709 | -150 | 4.3 | CTGTAAAGCAATTAATACAT |
| Shewanella loihica PV-4 | Shew_1925 | -175 | 4.7 | TTGTAAAGCTAGCGATACAT |
| Shewanella pealeana ATCC 700345 | Spea_2246 | -161 | 4.8 | ATGTAAACCAATATATACAT |
| Shewanella halifaxensis HAW-EB4 | Shal_2234 | -161 | 4.8 | ATGTAAACCAATATATACAT |
| Shewanella piezotolerans WP3 | swp_2606 | -162 | 4.8 | ATGTAAACCAATATATACAT |
| Shewanella sediminis HAW-EB3 | Ssed_2329 | -172 | 4.4 | TTGTAAAGCTAAAGATACGC |
| Shewanella woodyi ATCC 51908 | Swoo_2278 | -171 | 4 | ATGTAAAGCTAAACATACGG |
|
Position: -154
Score: 4.4 Sequence: ACGTAAGTTTAGCTTTACAG
Locus tag: Sbal195_2384
|
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| Sbal195_2384 | -154 | 4.4 | ACGTAAGTTTAGCTTTACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: emrD | ||||
| Ortholog function: multidrug resistance protein D | ||||
| Shewanella oneidensis MR-1 | SO_2389 | -152 | 4.5 | ATGTAAGCTTAATTTTACAG |
| Shewanella putrefaciens CN-32 | Sputcn32_2030 | -257 | 3.7 | ATATCAAGTATTTTATCCAC |
| -114 | 4.6 | GCGTAAGTTTAACTTTACAA | ||
| Shewanella sp W3-18-1 | Sputw3181_1983 | -257 | 3.7 | ATATCAAGTATTTTATCCAC |
| -114 | 4.6 | GCGTAAGTTTAACTTTACAA | ||
| Shewanella sp ANA-3 | Shewana3_1989 | -152 | 4.6 | GTGTAAGCTTAGTTTGACAA |
| Shewanella sp MR-4 | Shewmr4_1936 | -218 | 4 | GTGGCAATTAATTTTACCAG |
| -152 | 4.6 | GTGTAAGCTAAATTTTACAG | ||
| Shewanella sp MR-7 | Shewmr7_2040 | -218 | 4 | GTGGCAATTAATTTTACCAG |
| -152 | 4.6 | GTGTAAGCTAAATTTTACAG | ||
| Shewanella baltica OS155 | Sbal_2085 | -154 | 4.4 | ACGTAAGTTTAGCTTTACAG |
| Shewanella sediminis HAW-EB3 | Ssed_2287 | -182 | 4 | CTGTAACGCCATCAATACAA |
| -161 | 4 | GTGTAAGCTTGCGTTTACAG | ||
| Shewanella woodyi ATCC 51908 | Swoo_2329 | -160 | 4.1 | TCGTAAGTATAGATTTACGC |
|
Position: -299
Score: 4 Sequence: TTGGCAAAAAAGCCTGCCAA
Position: -102
Score: 4.5 Sequence: TTGTAATCTTAACTTGACGC
Position: -81
Score: 3.7 Sequence: GTGTAGCGTGAAGTTGCCAT
Locus tag: Sbal195_2398
|
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| Sbal195_2398 | -299 | 4 | TTGGCAAAAAAGCCTGCCAA | |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| -81 | 3.7 | GTGTAGCGTGAAGTTGCCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroA | ||||
| Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | ||||
| Shewanella oneidensis MR-1 | SO_2404 | -101 | 3.8 | TAGTAACGTAAACTTGACGT |
| -80 | 3.6 | ATGTAGTGTGAAGTTGCCAT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2044 | -299 | 4 | TTGGCAAAAAAGCCTGCCAA |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| Shewanella sp W3-18-1 | Sputw3181_1969 | -298 | 4 | TTGGCAAAAAAGCCTGCCAA |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| Shewanella sp ANA-3 | Shewana3_1975 | -300 | 3.9 | CTGGCAAAAAAGCCTGCCAA |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| Shewanella sp MR-4 | Shewmr4_1922 | -300 | 3.9 | CTGGCAAAAAAGCCTGCCAA |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| Shewanella sp MR-7 | Shewmr7_2056 | -298 | 3.9 | CTGGCAAAAAAGCCTGCCAA |
| -101 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| Shewanella baltica OS155 | Sbal_2068 | -299 | 4 | TTGGCAAAAAAGCCTGCCAA |
| -102 | 4.5 | TTGTAATCTTAACTTGACGC | ||
| -81 | 3.7 | GTGTAGCGTGAAGTTGCCAT | ||
| Shewanella denitrificans OS217 | Sden_1751 | -131 | 4.5 | TTGGAAAGATAAGCTGACAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_2125 | -328 | 4.3 | TTGGAAAGTTAACGTAACAA |
| -107 | 4.1 | CTGTAATGAATTTGTTCCAC | ||
| Shewanella amazonensis SB2B | Sama_1734 | -266 | 3.8 | ATGGCAACAAATCTTGCAAT |
| Shewanella loihica PV-4 | Shew_1952 | -268 | 4 | TTGGCAAATTTTCATGCCAG |
| Shewanella pealeana ATCC 700345 | Spea_2071 | -290 | 4.2 | CCGGAAATTTTTAGTTCCAC |
| Shewanella sediminis HAW-EB3 | Ssed_2300 | -334 | 3.8 | ATGGCATGAAATTGTTCCAG |
| Shewanella woodyi ATCC 51908 | Swoo_2309 | -323 | 3.8 | CTGGCATGTTTTTCTTCCAC |
| -89 | 3.9 | TTGTGTATCAATATTTGCAA | ||
|
Position: -156
Score: 4 Sequence: TTGGCAGGCTTTTTTGCCAA
Locus tag: Sbal195_2399
|
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| Sbal195_2399 | -156 | 4 | TTGGCAGGCTTTTTTGCCAA | |
| Supported by regulated orthologs from reference regulons | ||||