Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bkdA1 gene

Properties
Regulog: TyrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Amino acid utilization
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Built upon 312 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -150
Score: 4.29316
Sequence: CTGTAAAGCAATTAATACAT
Locus tag: Sama_1709
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sama_1710
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sama_1711
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -150 4.3 CTGTAAAGCAATTAATACAT Sama_1709
Shewanella baltica OS155
Position: -160
Score: 4.91636
Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sbal_4508
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sbal_4507
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sbal_4506
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.9 TTGTAAAGCAATATATACAT Sbal_4508
Shewanella denitrificans OS217
Position: -153
Score: 4.48424
Sequence: GCGTAAAGCAAATTATACAA
Locus tag: Sden_1786
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sden_1787
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sden_1788
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -153 4.5 GCGTAAAGCAAATTATACAA Sden_1786
Shewanella frigidimarina NCIMB 400
Position: -156
Score: 4.49875
Sequence: TCGTAAAGCAATATATACAT
Locus tag: Sfri_1935
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sfri_1936
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sfri_1937
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -156 4.5 TCGTAAAGCAATATATACAT Sfri_1935
Shewanella halifaxensis HAW-EB4
Position: -161
Score: 4.82092
Sequence: ATGTAAACCAATATATACAT
Locus tag: Shal_2234
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shal_2233
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shal_2232
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -161 4.8 ATGTAAACCAATATATACAT Shal_2234
Shewanella loihica PV-4
Position: -175
Score: 4.70177
Sequence: TTGTAAAGCTAGCGATACAT
Locus tag: Shew_1925
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shew_1926
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shew_1927
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -175 4.7 TTGTAAAGCTAGCGATACAT Shew_1925
Shewanella oneidensis MR-1
Position: -160
Score: 4.91636
Sequence: TTGTAAAGCAATATATACAT
Locus tag: SO_2339
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: SO_2340
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: SO_2341
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.9 TTGTAAAGCAATATATACAT SO_2339
Shewanella pealeana ATCC 700345
Position: -161
Score: 4.82092
Sequence: ATGTAAACCAATATATACAT
Locus tag: Spea_2246
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Spea_2245
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Spea_2244
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -161 4.8 ATGTAAACCAATATATACAT Spea_2246
Shewanella piezotolerans WP3
Position: -162
Score: 4.82092
Sequence: ATGTAAACCAATATATACAT
Locus tag: swp_2606
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: swp_2605
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: swp_2604
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -162 4.8 ATGTAAACCAATATATACAT swp_2606
Shewanella putrefaciens CN-32
Position: -160
Score: 4.91636
Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sputcn32_1885
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sputcn32_1886
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sputcn32_1887
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.9 TTGTAAAGCAATATATACAT Sputcn32_1885
Shewanella sediminis HAW-EB3
Position: -172
Score: 4.40072
Sequence: TTGTAAAGCTAAAGATACGC
Locus tag: Ssed_2329
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Ssed_2328
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Ssed_2327
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -172 4.4 TTGTAAAGCTAAAGATACGC Ssed_2329
Shewanella sp ANA-3
Position: -160
Score: 4.84932
Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewana3_2131
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewana3_2130
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewana3_2129
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.8 TTGTAAAGCATTATATACAT Shewana3_2131
Shewanella sp MR-4
Position: -160
Score: 4.84932
Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewmr4_2028
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewmr4_2027
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewmr4_2026
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.8 TTGTAAAGCATTATATACAT Shewmr4_2028
Shewanella sp MR-7
Position: -160
Score: 4.84932
Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewmr7_1947
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewmr7_1948
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewmr7_1949
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.8 TTGTAAAGCATTATATACAT Shewmr7_1947
Shewanella sp W3-18-1
Position: -160
Score: 4.91636
Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sputw3181_2123
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sputw3181_2122
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sputw3181_2121
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -160 4.9 TTGTAAAGCAATATATACAT Sputw3181_2123
Shewanella woodyi ATCC 51908
Position: -171
Score: 4.03349
Sequence: ATGTAAAGCTAAACATACGG
Locus tag: Swoo_2278
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Swoo_2279
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Swoo_2280
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -171 4 ATGTAAAGCTAAACATACGG Swoo_2278
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