Propagation of SO4705 regulog to Shewanella baltica OS223
Source regulog: | SO4705 - Shewanellaceae |
Regulator type: | Transcription factor |
Regulator family: | XRE |
Regulation mode: | repressor |
Biological process: | |
Effector: | |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Shewanella baltica OS223 |
Orthologous TF(s) | Sbal223_4239 |
Regulated genes | 2 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -65
Score: 7.3 Sequence: TTGTAGTCTAGTCTTTTTTTGACTACAA
Locus tag: Sbal223_4239
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Sbal223_4239 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: SO4705 | ||||
Ortholog function: transcriptional regulator, XRE family | ||||
Shewanella oneidensis MR-1 | SO_4705 | -86 | 7.4 | TTGTAGTCTAGTGTATTTTTTACTACAA |
Shewanella putrefaciens CN-32 | Sputcn32_3866 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA |
Shewanella sp W3-18-1 | Sputw3181_0087 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA |
Shewanella sp ANA-3 | Shewana3_4059 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA |
Shewanella sp MR-4 | Shewmr4_3851 | -65 | 7 | TTGTAGTCTAGTCTTTTTTTGGCTACAA |
Shewanella sp MR-7 | Shewmr7_3944 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA |
Shewanella baltica OS155 | Sbal_0106 | -65 | 7.3 | TTGTAGTCTAGTCTTTTTTTGACTACAA |
Shewanella denitrificans OS217 | Sden_0218 | -65 | 7 | TTGTAGTCTAAAACAATTTTCGCTACAA |
Shewanella frigidimarina NCIMB 400 | Sfri_3903 | -64 | 4.8 | TTtTAGTCTAtgcTATTTTTacaaACAA |
Shewanella amazonensis SB2B | Sama_0680 | -65 | 6.6 | TTTTAGTCTATGTTATTTTTTACTACAA |
Shewanella loihica PV-4 | Shew_2560 | -65 | 6.6 | TTGTAGTCTAGCGGCTTTTTCATTACAA |
Shewanella pealeana ATCC 700345 | Spea_2004 | -65 | 7 | TTGTAGTCTAGTGTAATTTTCATTACAA |
Shewanella halifaxensis HAW-EB4 | Shal_2297 | -65 | 6.9 | TTGTAGTCTAGTGTAAATTTTATTACAA |
Shewanella piezotolerans WP3 | swp_2678 | -65 | 5.7 | TTGTAGTCTAGTGTAAAAACCGCTACAA |
Shewanella sediminis HAW-EB3 | Ssed_1608 | -65 | 7.1 | TTGTAGTCTAGCGAATTTTTTACTACAA |
Shewanella woodyi ATCC 51908 | Swoo_3044 | -84 | 6.8 | TTGTAGTCTAGCTAATTTTTCATTACAA |
Position: -216
Score: 7.3 Sequence: TTGTAGTCAAAAAAAGACTAGACTACAA
Locus tag: Sbal223_4240
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Sbal223_4240 | -216 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: SO4706 | ||||
Ortholog function: Malate synthase-related protein | ||||
Shewanella oneidensis MR-1 | SO_4706 | -174 | 7.4 | TTGTAGTAAAAAATACACTAGACTACAA |
Shewanella putrefaciens CN-32 | Sputcn32_3867 | -216 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA |
Shewanella sp W3-18-1 | Sputw3181_0086 | -216 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA |
Shewanella sp ANA-3 | Shewana3_4060 | -171 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA |
Shewanella sp MR-4 | Shewmr4_3852 | -172 | 7 | TTGTAGCCAAAAAAAGACTAGACTACAA |
Shewanella sp MR-7 | Shewmr7_3945 | -171 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA |
Shewanella baltica OS155 | Sbal_0105 | -214 | 7.3 | TTGTAGTCAAAAAAAGACTAGACTACAA |
Shewanella denitrificans OS217 | Sden_0217 | -128 | 7 | TTGTAGCGAAAATTGTTTTAGACTACAA |
Shewanella frigidimarina NCIMB 400 | Sfri_3904 | -111 | 4.8 | TTGTttgtAAAAATAgcaTAGACTAaAA |
Shewanella amazonensis SB2B | Sama_0681 | -119 | 6.6 | TTGTAGTAAAAAATAACATAGACTAAAA |
Shewanella pealeana ATCC 700345 | Spea_2005 | -112 | 7 | TTGTAATGAAAATTACACTAGACTACAA |
Shewanella halifaxensis HAW-EB4 | Shal_2296 | -113 | 6.9 | TTGTAATAAAATTTACACTAGACTACAA |
Shewanella piezotolerans WP3 | swp_2677 | -120 | 5.7 | TTGTAGCGGTTTTTACACTAGACTACAA |
Shewanella sediminis HAW-EB3 | Ssed_1609 | -170 | 7.1 | TTGTAGTAAAAAATTCGCTAGACTACAA |
Shewanella woodyi ATCC 51908 | Swoo_3043 | -137 | 6.8 | TTGTAATGAAAAATTAGCTAGACTACAA |