Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator SO4705 in Shewanellaceae

Properties
Regulator family: XRE
Regulation mode: repressor
Biological process:
Effector:
Regulog: SO4705 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_4706 SO4706 -174 7.4 TTGTAGTAAAAAATACACTAGACTACAA
SO_4705 SO4705 -86 7.4 TTGTAGTCTAGTGTATTTTTTACTACAA
Shewanella putrefaciens CN-32
Sputcn32_3867 SO4706 -216 7.3 TTGTAGTCAAAAAAAGACTAGACTACAA
Sputcn32_3866 SO4705 -65 7.3 TTGTAGTCTAGTCTTTTTTTGACTACAA
Shewanella sp W3-18-1
Sputw3181_0086 SO4706 -216 7.3 TTGTAGTCAAAAAAAGACTAGACTACAA
Sputw3181_0087 SO4705 -65 7.3 TTGTAGTCTAGTCTTTTTTTGACTACAA
Shewanella sp ANA-3
Shewana3_4060 SO4706 -171 7.3 TTGTAGTCAAAAAAAGACTAGACTACAA
Shewana3_4059 SO4705 -65 7.3 TTGTAGTCTAGTCTTTTTTTGACTACAA
Shewanella sp MR-4
Shewmr4_3851 SO4705 -65 7 TTGTAGTCTAGTCTTTTTTTGGCTACAA
Shewmr4_3852 SO4706 -172 7 TTGTAGCCAAAAAAAGACTAGACTACAA
Shewanella sp MR-7
Shewmr7_3945 SO4706 -171 7.3 TTGTAGTCAAAAAAAGACTAGACTACAA
Shewmr7_3944 SO4705 -65 7.3 TTGTAGTCTAGTCTTTTTTTGACTACAA
Shewanella baltica OS155
Sbal_0105 SO4706 -214 7.3 TTGTAGTCAAAAAAAGACTAGACTACAA
Sbal_0106 SO4705 -65 7.3 TTGTAGTCTAGTCTTTTTTTGACTACAA
Shewanella denitrificans OS217
Sden_0217 SO4706 -128 7 TTGTAGCGAAAATTGTTTTAGACTACAA
Sden_0218 SO4705 -65 7 TTGTAGTCTAAAACAATTTTCGCTACAA
Shewanella frigidimarina NCIMB 400
Sfri_3903 SO4705 -64 4.8 TTtTAGTCTAtgcTATTTTTacaaACAA
Sfri_3904 SO4706 -111 4.8 TTGTttgtAAAAATAgcaTAGACTAaAA
Shewanella amazonensis SB2B
Sama_0681 SO4706 -119 6.6 TTGTAGTAAAAAATAACATAGACTAAAA
Sama_0680 SO4705 -65 6.6 TTTTAGTCTATGTTATTTTTTACTACAA
Shewanella loihica PV-4
Shew_2559 SO4706 -144 6.6 TTGTAATGAAAAAGCCGCTAGACTACAA
Shew_2560 SO4705 -65 6.6 TTGTAGTCTAGCGGCTTTTTCATTACAA
Shewanella pealeana ATCC 700345
Spea_2005 SO4706 -112 7 TTGTAATGAAAATTACACTAGACTACAA
Spea_2004 SO4705 -65 7 TTGTAGTCTAGTGTAATTTTCATTACAA
Shewanella halifaxensis HAW-EB4
Shal_2296 SO4706 -113 6.9 TTGTAATAAAATTTACACTAGACTACAA
Shal_2297 SO4705 -65 6.9 TTGTAGTCTAGTGTAAATTTTATTACAA
Shewanella piezotolerans WP3
swp_2677 SO4706 -120 5.7 TTGTAGCGGTTTTTACACTAGACTACAA
swp_2678 SO4705 -65 5.7 TTGTAGTCTAGTGTAAAAACCGCTACAA
Shewanella sediminis HAW-EB3
Ssed_1609 SO4706 -170 7.1 TTGTAGTAAAAAATTCGCTAGACTACAA
Ssed_1608 SO4705 -65 7.1 TTGTAGTCTAGCGAATTTTTTACTACAA
Shewanella woodyi ATCC 51908
Swoo_3043 SO4706 -137 6.8 TTGTAATGAAAAATTAGCTAGACTACAA
Swoo_3044 SO4705 -84 6.8 TTGTAGTCTAGCTAATTTTTCATTACAA
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