Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of IlvY regulog to Psychromonas ingrahamii 37

Reference regulog properties
Source regulog: IlvY - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Branched-chain amino acid biosynthesis
Effector: Acetohydroxybutyrate; 2-Acetolactate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Psychromonas ingrahamii 37
Orthologous TF(s) Ping_0855
Regulated genes 1
Built upon 64 sites [see more]
Predicted regulatory interactions in Psychromonas ingrahamii 37
Locus tag Position Score Sequence
Position: -139
Score: 4.8
Sequence: GTTTCATTATCTGCAAC
Position: -108
Score: 4.8
Sequence: ATATCATTTTGTGCAAT
Locus tag: Ping_0853
Ping_0853 -139 4.8 GTTTCATTATCTGCAAC
-108 4.8 ATATCATTTTGTGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: Ketol-acid reductoisomerase (EC 1.1.1.86)
Shewanella oneidensis MR-1 SO_4349 -147 5.1 ATTGCAAAAAACGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella putrefaciens CN-32 Sputcn32_3615 -147 5 GTTGCGAATAATGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella sp W3-18-1 Sputw3181_3755 -147 5 GTTGCGAATAATGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella sp ANA-3 Shewana3_0355 -147 5.2 ATTGCATAAAACGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella sp MR-4 Shewmr4_0361 -147 5.2 ATTGCATAAAACGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella sp MR-7 Shewmr7_3665 -147 5.2 ATTGCATAAAACGCAAT
-116 4.8 ATATCATTTTAAGCAAC
Shewanella baltica OS155 Sbal_4032 -146 4.8 GTTGCGCATAATGCAAT
-115 4.9 ATATCATTTTAAGCAAT
Shewanella denitrificans OS217 Sden_3415 -199 5 ATTGCAAAAAACGCAAC
-168 4.9 ATATCATTTTAAGCAAT
Shewanella frigidimarina NCIMB 400 Sfri_0421 -146 5.1 GTTGCATTAATTGCAAC
-115 4.9 ATATCATTTTAAGCAAT
Shewanella amazonensis SB2B Sama_3282 -149 5 GTTGCAAAAATTGAAAT
-118 4.6 ATATCATTTTGAGCAAT
Shewanella loihica PV-4 Shew_0288 -139 5.3 ATTGCAAAAAATGCAAT
-108 4.9 ATATCATTTTAAGCAAT
Shewanella pealeana ATCC 700345 Spea_0344 -136 4.6 GTTGCAAAAGATGCAAC
-105 4.9 ATATCATTTTAAGCAAT
Shewanella halifaxensis HAW-EB4 Shal_3945 -138 5 ATTGCAAAAAACGCAAC
-107 4.9 ATATCATTTTAAGCAAT
Shewanella piezotolerans WP3 swp_0358 -138 4.7 GTTGCACAAAACGCAAC
-107 4.9 ATATCATTTTAAGCAAT
Shewanella sediminis HAW-EB3 Ssed_4166 -139 4.6 GTTGCGTAAAGCGCAAT
-108 4.9 ATATCATTTTAAGCAAT
Shewanella woodyi ATCC 51908 Swoo_0441 -139 5.2 GTTGCAATAATTGCAAT
-108 4.9 ATATCATTTTAAGCAAT