Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YrkD regulog to Geobacillus sp. Y412MC61

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC61
Orthologous TF(s) GYMC61_2895
Regulated genes 6
Built upon 39 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC61
Locus tag Position Score Sequence
Position: -37
Score: 5.5
Sequence: ATACCCATATATGTAT
Locus tag: GYMC61_2893
GYMC61_2893 -37 5.5 ATACCCATATATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkE
Ortholog function: Putative sulfur reduction protein
Bacillus amyloliquefaciens FZB42 RBAM_005430 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0798 -32 5.4 ATACCCCTATAGGTAA
Bacillus licheniformis DSM 13 BLi02794 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0190 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26540 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2069 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2652 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -52
Score: 5.6
Sequence: ATACCCATAGGGGTAA
Locus tag: GYMC61_2894
GYMC61_2894 -52 5.6 ATACCCATAGGGGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkI
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2345 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Geobacillus kaustophilus HTA426 GK2070 -52 5.6 ATACCCATAGGGGTAA
Position: -97
Score: 5.2
Sequence: ATACACGTATATGTAT
Locus tag: GYMC61_2900
GYMC61_2900 -97 5.2 ATACACGTATATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK2076
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Geobacillus kaustophilus HTA426 GK2076 -103 4.9 ATACATATACACGTAT
-97 5.2 ATACACGTATATGTAT
Position: -91
Score: 4.5
Sequence: AATCCCCTATGGGTAT
Locus tag: GYMC61_2915
GYMC61_2915 -91 4.5 AATCCCCTATGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmt2
Ortholog function: Sulfide-quinone reductase
Anoxybacillus flavithermus WK1 Aflv_0282 -93 4.5 AATCCCCTATGGGTAT
Bacillus licheniformis DSM 13 BLi02786 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Geobacillus kaustophilus HTA426 GK2090 -91 4.5 AATCCCCTATGGGTAT
Position: -99
Score: 5.5
Sequence: ATACATATAGGGGTAT
Locus tag: GYMC61_2916
GYMC61_2916 -99 5.5 ATACATATAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_0303
Ortholog function: CoA-disulfide reductase (EC 1.8.1.14) / Rhodanese domain protein
Anoxybacillus flavithermus WK1 Aflv_1299 -32 4.6 TTACACGTACTTGTAT
Bacillus cereus ATCC 14579 BC0791 -68 5.8 ATACCCATACAGGTAT
Geobacillus kaustophilus HTA426 GK2091 -98 5.5 ATACATATAGGGGTAT
© 2009-2020 RegPrecise